RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 A4GALTQ9NPC4 353 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 NOX1Q9Y5S8 564 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 SVEP1Q4LDE5 3571 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 A0A1B0GWA3 101 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 M0R233 179 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 TRAF3IP2O43734 574 aaPredicted RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 LILRA1O75019 489 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 HLA-HP01893 362 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 ETS2P15036 469 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 PCMT1P22061 227 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 HTR2AP28223 471 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 CDH15P55291 814 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 GALK2Q01415 458 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 MFSD13AQ14CX5 517 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 TRMT5Q32P41 509 aaKnown RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 GCNT6Q5T4J0 391 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 GKAP1Q5VSY0 366 aaPredicted RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 UGT2A3Q6UWM9 527 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 NET1Q7Z628 596 aaPredicted RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 KRT73Q86Y46 540 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 TMEM123Q8N131 208 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 LSMEM1Q8N8F7 131 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 ADPRHL1Q8NDY3 354 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 GTF2H4Q92759 462 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 MRPL24Q96A35 216 aaKnown RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 OR52B2Q96RD2 323 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 EPYCQ99645 322 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 EMC6Q9BV81 110 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 SPATA5L1Q9BVQ7 753 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 PAIP1Q9H074 479 aaKnown RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 NKIRAS1Q9NYS0 192 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 TESQ9UGI8 421 aaKnown RBP11.44□□□□□ -0.58
VCL-205ENST00000478896 SLC13A4Q9UKG4 626 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 POFUT2Q9Y2G5 429 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 SPEF1Q9Y4P9 236 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 STAB1Q9NY15 2570 aa11.44□□□□□ -0.58
VCL-205ENST00000478896 TMEM129A0AVI4 362 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 SERPINI2O75830 405 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 RAB36O95755 333 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 B4GALT1P15291 398 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 ITGA2P17301 1181 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 NR4A1P22736 598 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 PTDSS1P48651 473 aaKnown RBP11.43□□□□□ -0.58
VCL-205ENST00000478896 RGS8P57771 180 aaPredicted RBP11.43□□□□□ -0.58
VCL-205ENST00000478896 PIGFQ07326 219 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 CAMK2DQ13557 499 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 RIN1Q13671 783 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 PHYHD1Q5SRE7 291 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 ULK3Q6PHR2 472 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 MAVSQ7Z434 540 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 SNX32Q86XE0 403 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 C10orf53Q8N6V4 93 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 OR6N1Q8NGY5 312 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 SLC47A1Q96FL8 570 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 MS4A3Q96HJ5 214 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 SYT3Q9BQG1 590 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 MRPL37Q9BZE1 423 aaKnown RBP11.43□□□□□ -0.58
VCL-205ENST00000478896 ULBP2Q9BZM5 246 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 NARFLQ9H6Q4 476 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 TMEM27Q9HBJ8 222 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 MED29Q9NX70 200 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 CORINQ9Y5Q5 1042 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
VCL-205ENST00000478896 IGKV1D-42A0A075B6H8 117 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 A0A087WUJ7 227 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 ZNF726A6NNF4 738 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 SYNGR3O43761 229 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 FZD7O75084 574 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 ARAFP10398 606 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 BMP2P12643 396 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
VCL-205ENST00000478896 AHCYP23526 432 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 LSP1P33241 339 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
VCL-205ENST00000478896 RPS23P62266 143 aaKnown RBP11.42□□□□□ -0.58
VCL-205ENST00000478896 PUDPQ08623 228 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 PMS2P3Q13401 168 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 FAM91A1Q658Y4 838 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 REEP3Q6NUK4 255 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 DHRS4L2Q6PKH6 230 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 GLCCI1Q86VQ1 547 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 C20orf196Q8IYI0 205 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 FOXB1Q99853 325 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 MS4A5Q9H3V2 200 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 OCEL1Q9H607 264 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 REV1Q9UBZ9 1251 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
VCL-205ENST00000478896 LOC102725191A0A1B0GVB3 256 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 A0A1W2PPW3 197 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 B4DSR2 109 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 MS4A18H0YCH9 400 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 POLR3GO15318 223 aaPredicted RBP11.41□□□□□ -0.58
VCL-205ENST00000478896 UBL3O95164 117 aa11.41□□□□□ -0.58
VCL-205ENST00000478896 HPRP00739 348 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms