RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 CCDC36Q8IYA8 594 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 MUC15Q8N387 334 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 GPR137CQ8N3F9 429 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 RNF217Q8TC41 542 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 KATNB1Q9BVA0 655 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 HEATR1Q9H583 2144 aaKnown RBP20.43■□□□□ 0.86
C9orf3-215ENST00000478473 BARX1Q9HBU1 254 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-215ENST00000478473 AP3M1Q9Y2T2 418 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 NAV3Q8IVL0 2385 aa20.43■□□□□ 0.86
C9orf3-215ENST00000478473 CSPG4Q6UVK1 2322 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 IGHV1-18A0A0C4DH31 117 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 LRRN3E7EW58 273 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 IFNA14P01570 189 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 IGHV4-39P01824 125 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 TTC33Q6PID6 262 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-215ENST00000478473 CLEC9AQ6UXN8 241 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 VANGL1Q8TAA9 524 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-215ENST00000478473 PROX1Q92786 737 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 ZNF837Q96EG3 531 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-215ENST00000478473 SLC38A2Q96QD8 506 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 CRLF2Q9HC73 371 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 POU2F3Q9UKI9 436 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 SLC7A7Q9UM01 511 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 USP22Q9UPT9 525 aa20.42■□□□□ 0.86
C9orf3-215ENST00000478473 ZNF99A8MXY4 864 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-215ENST00000478473 CCDC22O60826 627 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 ASAH2BP0C7U1 165 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 APOBEC3AP31941 199 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-215ENST00000478473 UBE2NP61088 152 aaKnown RBP20.41■□□□□ 0.86
C9orf3-215ENST00000478473 ARF1P84077 181 aaKnown RBP20.41■□□□□ 0.86
C9orf3-215ENST00000478473 POU3F1Q03052 451 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-215ENST00000478473 SF3A3Q12874 501 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■■■■□ 26.1
C9orf3-215ENST00000478473 CLEC12BQ2HXU8 276 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 CEACAM16Q2WEN9 425 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 C8orf82Q6P1X6 216 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-215ENST00000478473 ARPINQ7Z6K5 226 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 CARM1Q86X55 608 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 FBXL14Q8N1E6 418 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 TAS2R5Q9NYW4 299 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 ARMCX1Q9P291 453 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 ZNF229Q9UJW7 825 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 TLN2Q9Y4G6 2542 aa20.41■□□□□ 0.86
C9orf3-215ENST00000478473 SLC35F4A4IF30 521 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 H7C417 338 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 LY6G6DO95868 133 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 THRBP10828 461 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 CBR1P16152 277 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 KDELR2P33947 212 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 RBM34P42696 430 aaKnown RBP20.4■□□□□ 0.86
C9orf3-215ENST00000478473 TNK1Q13470 666 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 PHYHD1Q5SRE7 291 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 OR2T12Q8NG77 320 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 LIPHQ8WWY8 451 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 RCN3Q96D15 328 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 TXNDC15Q96J42 360 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 MEPEQ9NQ76 525 aaPredicted RBP20.4■□□□□ 0.86
C9orf3-215ENST00000478473 MED29Q9NX70 200 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 SH3GLB1Q9Y371 365 aa20.4■□□□□ 0.86
C9orf3-215ENST00000478473 ATP6V1G2-DDX39BF2Z307 99 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 NDUFS7O75251 213 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 OR5F1O95221 314 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 FABP6P51161 128 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 WDFY1Q8IWB7 410 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 SLC15A3Q8IY34 581 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 MICU2Q8IYU8 434 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 ADAD1Q96M93 576 aaKnown RBP20.39■□□□□ 0.85
C9orf3-215ENST00000478473 EMC6Q9BV81 110 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 NANSQ9NR45 359 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 CMTM6Q9NX76 183 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 MOKQ9UQ07 419 aa20.39■□□□□ 0.85
C9orf3-215ENST00000478473 FN1P02751 2386 aaKnown RBP20.39■□□□□ 0.85
C9orf3-215ENST00000478473 A0A096LPE4 126 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 A0A1W2PPZ6 126 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 ELOVL7A1L3X0 281 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 CH25HO95992 272 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 TSPAN19P0C672 248 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 CECR9P0C854 216 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 ADORA3P0DMS8 318 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 COX4I1P13073 169 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 SELENOWP63302 87 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 NAAAQ02083 359 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 SWI5Q1ZZU3 235 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 CYBRD1Q53TN4 286 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 HACD2Q6Y1H2 254 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 SLC46A3Q7Z3Q1 461 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 C10orf53Q8N6V4 93 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 OR6X1Q8NH79 312 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 HOPXQ9BPY8 73 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-215ENST00000478473 CACNG6Q9BXT2 260 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 B3GNT2Q9NY97 397 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 GDF2Q9UK05 429 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-215ENST00000478473 ATP23Q9Y6H3 246 aa20.38■□□□□ 0.85
C9orf3-215ENST00000478473 PDE5AO76074 875 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 CRYAAP02489 173 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 MT-ND1P03886 318 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 PTNP21246 168 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 AHCYP23526 432 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 ARR3P36575 388 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 ACVR1BP36896 505 aa20.37■□□□□ 0.85
C9orf3-215ENST00000478473 IL1RL1Q01638 556 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms