RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SVOPLQ8N434 492 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 DNAJC22Q8N4W6 341 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 LRRC75AQ8NAA5 344 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 CHDHQ8NE62 594 aaPredicted RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 OR1L4Q8NGR5 311 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 OR2Y1Q8NGV0 311 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 GIPC3Q8TF64 312 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 FAR1Q8WVX9 515 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 RGP1Q92546 391 aaPredicted RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 PINX1Q96BK5 328 aaKnown RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 C12orf43Q96C57 262 aaKnown RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 TM4SF18Q96CE8 201 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 CMTM5Q96DZ9 223 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 WDR34Q96EX3 536 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 POM121L2Q96KW2 1035 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 MAGEB18Q96M61 343 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 VSTM2LQ96N03 204 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 TGM7Q96PF1 710 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 FYTTD1Q96QD9 318 aaKnown RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 OR5B12Q96R08 314 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 HBEGFQ99075 208 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 PFDN5Q99471 154 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 ECSITQ9BQ95 431 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 DCUN1D5Q9BTE7 237 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 H2AFJQ9BTM1 129 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 MND1Q9BWT6 205 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 BEX2Q9BXY8 128 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 SYT4Q9H2B2 425 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 TMBIM4Q9HC24 238 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 IL1RAPQ9NPH3 570 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 EQTNQ9NQ60 294 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 MRPL17Q9NRX2 175 aaKnown RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 GPR173Q9NS66 373 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 ACSS1Q9NUB1 689 aaPredicted RBP3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 DDIT4Q9NX09 232 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 GPR83Q9NYM4 423 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 KIAA1456Q9P272 454 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 MIOXQ9UGB7 285 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 MLXQ9UH92 298 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 KCNIP3Q9Y2W7 256 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 MEMO1Q9Y316 297 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 USP54Q70EL1 1684 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 CRB1P82279 1406 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 TNS2Q63HR2 1409 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 SBF2Q86WG5 1849 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 DOT1LQ8TEK3 1739 aa3.16□□□□□ -1.9
FNDC3B-209ENST00000478016 PAPPAQ13219 1627 aa3.15□□□□□ -1.9
FNDC3B-209ENST00000478016 FLT4P35916 1363 aa3.15□□□□□ -1.9
FNDC3B-209ENST00000478016 ZCWPW2A0A1B0GU75 182 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 hCG_38984A0A1B0GV85 526 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 A0A1B0GVL5 298 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 A0A1W2PPV9 198 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 MYMKA6NI61 221 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 I6L893 689 aaPredicted RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 M0QYV0 167 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 M0QZ92 97 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 NKX2-8O15522 239 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 TGOLN2O43493 480 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 CHST1O43916 411 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 UGT2B11O75310 529 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 RP2O75695 350 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 SCGNO76038 276 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 AP2A2O94973 939 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 CLDN7O95471 211 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 MT-CYBP00156 380 aaPredicted RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 MT-CO3P00414 261 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 OAS1P00973 400 aaKnown RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 FGGP02679 453 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 PRKCGP05129 697 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 RAB40ALP0C0E4 278 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 ANKRD34CP0C6C1 535 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 ACSM4P0C7M7 580 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 C8orf88P0DMB2 117 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 TMEM225BP0DP42 221 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 MBL2P11226 248 aaPredicted RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 ZNF35P13682 527 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 B4GALT1P15291 398 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 MUC1P15941 1255 aaPredicted RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 HLA-GP17693 338 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 FCARP24071 287 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 CDX1P47902 265 aaPredicted RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 UQCRFS1P47985 274 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 CSNK1A1P48729 337 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 ASCL1P50553 236 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 CLCN3P51790 818 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 GPR143P51810 404 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 XKP51811 444 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 KPNA2P52292 529 aaKnown RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 DNAJB13P59910 316 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 SNAP25P60880 206 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 RPL15P61313 204 aaKnown RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 RPL19P84098 196 aaKnown RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 ZXDBP98169 803 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 IL5RAQ01344 420 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 TFF2Q03403 129 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 SLC10A2Q12908 348 aaPredicted RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 HSPB3Q12988 150 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 GRIK2Q13002 908 aa3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 GANABQ14697 944 aaKnown RBP3.15□□□□□ -1.91
FNDC3B-209ENST00000478016 KPNB1Q14974 876 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms