RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TIGARQ9NQ88 270 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 DUSP22Q9NRW4 184 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 FAIMQ9NVQ4 179 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 KLHL9Q9P2J3 617 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MALT1Q9UDY8 824 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 MRTO4Q9UKD2 239 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 KCNS2Q9ULS6 477 aa3.96□□□□□ -1.78
CKS1B-207ENST00000477676 UTP11Q9Y3A2 253 aaKnown RBP3.96□□□□□ -1.78
CKS1B-207ENST00000477676 IGHV1-18A0A0C4DH31 117 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 A0A1W2PPM1 405 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 TMEM129A0AVI4 362 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 TMEM233B4DJY2 109 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 LYNX1G3V0Z9 82 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 KIF2AO00139 706 aaPredicted RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 KLF11O14901 512 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 KIAA0513O60268 411 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 FCMRO60667 390 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SEC22BO75396 215 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 RSL1D1O76021 490 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 NUDT14O95848 222 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SNRPAP09012 282 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ALOX5P09917 674 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 LYNX1P0DP58 116 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 LAMP1P11279 417 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 BCKDHAP12694 445 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 APEHP13798 732 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF23P17027 643 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SLC7A1P30825 629 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 CALCRP30988 508 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 LCN1P31025 176 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 PDLIM4P50479 330 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ATP12AP54707 1039 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 RAB1AP62820 205 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 H3F3AP84243 136 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 FUT5Q11128 374 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 VPS26BQ4G0F5 336 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 HIKESHIQ53FT3 197 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 DCST2Q5T1A1 773 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 PDZK1Q5T2W1 519 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 TSPO2Q5TGU0 170 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ZCCHC12Q6PEW1 402 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 DEF8Q6ZN54 512 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 IKBIPQ70UQ0 350 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 LINGO2Q7L985 606 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SZRD1Q7Z422 152 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 MTERF4Q7Z6M4 381 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 HMGN2P46Q86SG4 172 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 CARM1Q86X55 608 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF100Q8IYN0 542 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 CLEC4FQ8N1N0 589 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 MMGT1Q8N4V1 131 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 RFLNBQ8N5W9 214 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 CCNYL1Q8N7R7 359 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ZIC4Q8N9L1 334 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 NOA1Q8NC60 698 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 FAM71CQ8NEG0 241 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 OR7A2PQ8NGA2 310 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 OR5D16Q8NGK9 328 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 OR5W2Q8NH69 310 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 RFWD2Q8NHY2 731 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 PSMA8Q8TAA3 256 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 REXO5Q96IC2 774 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 STACQ99469 402 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SDF2Q99470 211 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 WACQ9BTA9 647 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 THUMPD3Q9BV44 507 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 CCDC106Q9BWC9 280 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 OR11A1Q9GZK7 315 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 RAB17Q9H0T7 212 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 PIGUQ9H490 435 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SLC17A5Q9NRA2 495 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 CTPS2Q9NRF8 586 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 SLC7A10Q9NS82 523 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ACSS1Q9NUB1 689 aaPredicted RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 TAS2R16Q9NYV7 291 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF580Q9UK33 172 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 FBXO9Q9UK97 447 aaPredicted RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 POU2F3Q9UKI9 436 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 MOKQ9UQ07 419 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 MGAT4BQ9UQ53 548 aa3.95□□□□□ -1.78
CKS1B-207ENST00000477676 WBP11Q9Y2W2 641 aaKnown RBP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.95□□□□□ -1.78
CKS1B-207ENST00000477676 LOC390937A0A1W2PQ73 354 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 CIB4A0PJX0 185 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 SERINC4A6NH21 518 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 CCT8L1PA6NM43 557 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 CLDN24A6NM45 220 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 GJE1A6NN92 205 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF785A8K8V0 405 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 H3BUI4 141 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 GTPBP1O00178 669 aaKnown RBP3.94□□□□□ -1.78
CKS1B-207ENST00000477676 SULT2B1O00204 365 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 NDUFS8O00217 210 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 NR5A2O00482 541 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 AP3D1O14617 1153 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 WNT9BO14905 357 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 LSM1O15116 133 aaKnown RBP3.94□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF264O43296 627 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 TCF21O43680 179 aa3.94□□□□□ -1.78
CKS1B-207ENST00000477676 ZNF500O60304 480 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms