RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ZIK1Q3SY52 487 aaPredicted RBP14.4□□□□□ -0.1
VHL-203ENST00000477538 CLEC12AQ5QGZ9 265 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 DPY19L2P2Q6ZN68 376 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 CREB3L2Q70SY1 520 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 SLC35D2Q76EJ3 337 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 GCNT2Q8N0V5 402 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 GMPPAQ96IJ6 420 aaPredicted RBP14.4□□□□□ -0.1
VHL-203ENST00000477538 ZFP3Q96NJ6 502 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 VKORC1Q9BQB6 163 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 KATNB1Q9BVA0 655 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 IFT27Q9BW83 186 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 POLDIP3Q9BY77 421 aaKnown RBP14.4□□□□□ -0.1
VHL-203ENST00000477538 RASSF4Q9H2L5 321 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 TXNIPQ9H3M7 391 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 BCO1Q9HAY6 547 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 GP6Q9HCN6 339 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 NRIP3Q9NQ35 241 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 SMPD3Q9NY59 655 aaPredicted RBP14.4□□□□□ -0.1
VHL-203ENST00000477538 FLVCR1Q9Y5Y0 555 aa14.4□□□□□ -0.1
VHL-203ENST00000477538 NPIPB13A6NJU9 1138 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ZNF724A8MTY0 619 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 NPIPB4C9JG80 1138 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 SNAP29O95721 258 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 IL2RAP01589 272 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 IGHMP01871 453 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 YES1P07947 543 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 IFNGR1P15260 489 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 GNLYP22749 145 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 UQCRFS1P47985 274 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 RPS6KA3P51812 740 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ERVK-25P63136 954 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 PMPCAQ10713 525 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 MELKQ14680 651 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ACKR1Q16570 336 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 TUSC5Q8IXB3 177 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ZIC4Q8N9L1 334 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 OR2T33Q8NG76 320 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ZNF775Q96BV0 537 aaPredicted RBP14.39□□□□□ -0.11
VHL-203ENST00000477538 INTS12Q96CB8 462 aaKnown RBP14.39□□□□□ -0.11
VHL-203ENST00000477538 TXNDC15Q96J42 360 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 RDH12Q96NR8 316 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ZNF385AQ96PM9 386 aaKnown RBP14.39□□□□□ -0.11
VHL-203ENST00000477538 MBOAT4Q96T53 435 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 TACO1Q9BSH4 297 aaKnown RBP14.39□□□□□ -0.11
VHL-203ENST00000477538 TOR3AQ9H497 397 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 MED29Q9NX70 200 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 MEMO1Q9Y316 297 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 ADAM18Q9Y3Q7 739 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 IER3IP1Q9Y5U9 82 aa14.39□□□□□ -0.11
VHL-203ENST00000477538 CACNA1CQ13936 2221 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 DLGAP1O14490 977 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 BHLHE40O14503 412 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 AKAP8O43823 692 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 SS18L1O75177 396 aaPredicted RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 TOXO94900 526 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 BCL10O95999 233 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 TMIGD3P0DMS9 266 aaPredicted RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 EPHA2P29317 976 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 AGTR1P30556 359 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 CEACAM8P31997 349 aaPredicted RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 POLR2IP36954 125 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 VHLP40337 213 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 DAP3P51398 398 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 BIDP55957 195 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 CLDN17P56750 224 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 RPL27P61353 136 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 GINS1Q14691 196 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 PTGES3Q15185 160 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 EIF2S3LQ2VIR3 472 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 PGGHGQ32M88 737 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 TMEM201Q5SNT2 666 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 TMEM211Q6ICI0 200 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 SLC27A4Q6P1M0 643 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 NHLRC1Q6VVB1 395 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 FAM122BQ7Z309 247 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 MARVELD2Q8N4S9 558 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 IQCF1Q8N6M8 205 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 OR4Q3Q8NH05 313 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 PRR7Q8TB68 274 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 ASB10Q8WXI3 467 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 TMEM45BQ96B21 275 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 ZNF570Q96NI8 536 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 ERMAPQ96PL5 475 aaPredicted RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 TSPAN32Q96QS1 320 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 DMRTA2Q96SC8 542 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 SLC25A19Q9HC21 320 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 GRHPRQ9UBQ7 328 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 ZNF346Q9UL40 294 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 BAIAP2Q9UQB8 552 aa14.38□□□□□ -0.11
VHL-203ENST00000477538 NOSIPQ9Y314 301 aaKnown RBP14.38□□□□□ -0.11
VHL-203ENST00000477538 ZNF462Q96JM2 2506 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 ZAR1LA6NP61 321 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 CCL21O00585 134 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 ARPC3O15145 178 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 CRHP06850 196 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 APEHP13798 732 aaKnown RBP14.37□□□□□ -0.11
VHL-203ENST00000477538 NOS3P29474 1203 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 SDHAP31040 664 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 GIPRP48546 466 aa14.37□□□□□ -0.11
VHL-203ENST00000477538 SMSP52788 366 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms