RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 KRT6BP04259 564 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 GP1BAP07359 652 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 GIMD1P0DJR0 217 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 C1GALT1C1LP0DN25 315 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 TROVE2P10155 538 aaKnown RBP eCLIP3.24□□□□□ -1.89
UBR3-209ENST00000477461 ERGP11308 486 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 TSPAN8P19075 237 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 ITIH1P19827 911 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 MAGP20916 626 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 ACP1P24666 158 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 EDNRAP25101 427 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 PSMB5P28074 263 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 PRDX3P30048 256 aaKnown RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 DUTP33316 252 aaKnown RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 KRT6CP48668 564 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 RPL14P50914 215 aaKnown RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 XGP55808 180 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 GNGT1P63211 74 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CCL7P80098 99 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 PRDX1Q06830 199 aaKnown RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 BST1Q10588 318 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 IFT88Q13099 833 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 ILKQ13418 452 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CLPPQ16740 277 aaPredicted RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 IMPG1Q17R60 797 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NKAIN2Q5VXU1 208 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 LIPJQ5W064 366 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 MED27Q6P2C8 311 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CYB5D1Q6P9G0 228 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 WDR74Q6RFH5 385 aaPredicted RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 SPESP1Q6UW49 350 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 FAM92BQ6ZTR7 304 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 MSANTD1Q6ZTZ1 278 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 FAM47EQ6ZV65 393 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 RPS27LQ71UM5 84 aaKnown RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 ASCL5Q7RTU5 278 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 SPATA21Q7Z572 469 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 KLHDC8AQ8IYD2 350 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CLYBLQ8N0X4 340 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NKAIN3Q8N8D7 197 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 LINC01555Q8NAE3 123 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 DEFB124Q8NES8 71 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 TTLQ8NG68 377 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 OR2L3Q8NG85 312 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 OR2A1Q8NGT9 310 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 AGR3Q8TD06 166 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NEIL2Q969S2 332 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 RERGQ96A58 199 aaPredicted RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 LURAP1Q96LR2 239 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 FAM218AQ96MZ4 157 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 PRAP1Q96NZ9 151 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 TGM7Q96PF1 710 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 ZNF382Q96SR6 550 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CENPKQ9BS16 269 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 DPH7Q9BTV6 452 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 EFCAB11Q9BUY7 163 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NTMT1Q9BV86 223 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NLNQ9BYT8 704 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 SHCBP1LQ9BZQ2 653 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 RAB33BQ9H082 229 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 UBQLN3Q9H347 655 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 LRRN3Q9H3W5 708 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 RIMS4Q9H426 269 aaPredicted RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 ELOVL6Q9H5J4 265 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 FANCEQ9HB96 536 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NMRK1Q9NWW6 199 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 AKAP7Q9P0M2 348 aaPredicted RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 ANKMY1Q9P2S6 941 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 POMT2Q9UKY4 750 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 SNX6Q9UNH7 406 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 SZT2Q5T011 3432 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 GPR179Q6PRD1 2367 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CUL9Q8IWT3 2517 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 OTOGLQ3ZCN5 2332 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 MUC6Q6W4X9 2439 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 MN1Q10571 1320 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 TRAV18A0A075B6X5 111 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 A0A0B4J203 849 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 A0A0J9YVX5 310 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TRBV4-1A0A0J9YWV2 114 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 A0A1W2PPV9 198 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SLC9B1P1A6NJY1 282 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TRPC5OSA6NMA1 111 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 A8MU76 341 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SRRM5B3KS81 715 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 D6RAR5 112 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 E7EQ34 232 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TMX2-CTNND1H3BSU7 103 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SLC1A7O00341 560 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 MANBAO00462 879 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TXNDC9O14530 226 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR7A17O14581 309 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 TOX3O15405 576 aaPredicted RBP3.23□□□□□ -1.89
UBR3-209ENST00000477461 OR1F1O43749 312 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 CYTIPO60759 359 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 MYO1DO94832 1006 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SERPIND1P05546 499 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 CAPN1P07384 714 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 CHRNGP07510 517 aa3.23□□□□□ -1.89
UBR3-209ENST00000477461 SLC35G6P0C7Q6 338 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms