RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	LHX2	P50458	406 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	EFNB2	P52799	333 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	DLX1	P56177	255 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	SEC61G	P60059	68 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ASPH	Q12797	758 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ARHGAP19	Q14CB8	494 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	OXA1L	Q15070	435 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	MICB	Q29980	383 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	C1orf220	Q5T0J3	134 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	C6orf89	Q6UWU4	347 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	KDM7A	Q6ZMT4	941 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	LUZP2	Q86TE4	346 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	TMEM61	Q8N0U2	210 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	SCFD1	Q8WVM8	642 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	NDRG1	Q92597	394 aa	Known RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	MCUR1	Q96AQ8	359 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	IFT74	Q96LB3	600 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	OR2M2	Q96R28	347 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	CHP1	Q99653	195 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	CENPK	Q9BS16	269 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	OR11A1	Q9GZK7	315 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ROGDI	Q9GZN7	287 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	EXO5	Q9H790	373 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	NEK6	Q9HC98	313 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	SMOX	Q9NWM0	555 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ZNF223	Q9UK11	482 aa	Predicted RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ADAM28	Q9UKQ2	775 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	KIAA1257	Q9ULG3	409 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	TP53TG5	Q9Y2B4	290 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	WSB1	Q9Y6I7	421 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	RPAP1	Q9BWH6	1393 aa	Predicted RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	IQANK1	A0A1B0GTG1	560 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	TCRBV9S1A1T	A0A576	114 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RBMY1B	A6NDE4	496 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RBMY1E	A6NEQ0	496 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334		A8MXQ7	604 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	LOC110117498-PIK3R3	F6TDL0	507 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	TSPAN12	O95859	305 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	PRB2	P02812	416 aa	Predicted RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	PCCA	P05165	728 aa	Predicted RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	FGF4	P08620	206 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RBMY1D	P0C7P1	496 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RBMY1A1	P0DJD3	496 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	MCF2	P10911	925 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	POU2F1	P14859	743 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	GNA11	P29992	359 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	FMO3	P31513	532 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	BTC	P35070	178 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	DDOST	P39656	456 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	CSNK1D	P48730	415 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	CCR6	P51684	374 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	PRMT2	P55345	433 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	C21orf59	P57076	290 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	OGDH	Q02218	1023 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	TGM3	Q08188	693 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	KLRB1	Q12918	225 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	VGLL4	Q14135	290 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	ATP6AP1	Q15904	470 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	DUSP7	Q16829	419 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	HADH	Q16836	314 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	SPANXN2	Q5MJ10	180 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	CTSL3P	Q5NE16	218 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	PDZK1	Q5T2W1	519 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	C1orf185	Q5T7R7	199 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	AGBL2	Q5U5Z8	902 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	GPR157	Q5UAW9	335 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RAET1L	Q5VY80	246 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	CTRB2	Q6GPI1	263 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	OR2A2	Q6IF42	318 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	ZNF620	Q6ZNG0	422 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	BZW1	Q7L1Q6	419 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	OTUD6A	Q7L8S5	288 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	ZNF429	Q86V71	674 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	CDR2L	Q86X02	465 aa	Predicted RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	ECHDC2	Q86YB7	292 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	PSTK	Q8IV42	348 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	ACOT4	Q8N9L9	421 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	MFSD9	Q8NBP5	474 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	OR52H1	Q8NGJ2	320 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	OR1L4	Q8NGR5	311 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	KCNG3	Q8TAE7	436 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RAB3IL1	Q8TBN0	382 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	TMEM158	Q8WZ71	300 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	STARD8	Q92502	1023 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	UFD1	Q92890	307 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	UBE2E3	Q969T4	207 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RNF185	Q96GF1	192 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	TIMD4	Q96H15	378 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	FCRL1	Q96LA6	429 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	SLC38A2	Q96QD8	506 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	CLCC1	Q96S66	551 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	EML4	Q9HC35	981 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	RPRD1B	Q9NQG5	326 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	KLHL28	Q9NXS3	571 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	KLK12	Q9UKR0	248 aa		2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	MTCL1	Q9Y4B5	1905 aa	Known RBP	2.69	□□□□□ -1.98
RBM39-231	ENST00000477334	IGLV3-16	A0A075B6K0	115 aa		2.68	□□□□□ -1.98
RBM39-231	ENST00000477334	KIR2DL5B	A0A0G2JN68	375 aa		2.68	□□□□□ -1.98
RBM39-231	ENST00000477334	KIR2DL5B	A0A0G2JPC4	375 aa		2.68	□□□□□ -1.98

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