RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 C2CD3Q4AC94 2353 aa8.95□□□□□ -0.98
CCM2-208ENST00000476594 RAI1Q7Z5J4 1906 aaPredicted RBP8.95□□□□□ -0.98
CCM2-208ENST00000476594 A0A1W2PRG6 482 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 ZNF99A8MXY4 864 aaPredicted RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 MCIDASD6RGH6 385 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 PLPP3O14495 311 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 RNF13O43567 381 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 TRAF3IP2O43734 574 aaPredicted RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 TPST2O60704 377 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 UPK3AO75631 287 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 SERPINI2O75830 405 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 ZNF432O94892 652 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CH25HO95992 272 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 IFNW1P05000 195 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 PRDX6P30041 224 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 LSP1P33241 339 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 TTKP33981 857 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 ARR3P36575 388 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CAPZA2P47755 286 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CSNK1A1P48729 337 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 NUDT2P50583 147 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 FOXG1P55316 489 aaPredicted RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 SELENOWP63302 87 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 ZP4Q12836 540 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 TAF11Q15544 211 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 ZNF74Q16587 644 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CEACAM16Q2WEN9 425 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 HIKESHIQ53FT3 197 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CYBRD1Q53TN4 286 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 LINC00114Q6XXX2 140 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CYP4Z1Q86W10 505 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 POU5F2Q8N7G0 328 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 FAM169BQ8N8A8 192 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 WDR31Q8NA23 367 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 IL17RDQ8NFM7 739 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 OR4F15Q8NGB8 312 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 LILRB1Q8NHL6 650 aaPredicted RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 PRRC1Q96M27 445 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 OR2M2Q96R28 347 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 ELAC2Q9BQ52 826 aaKnown RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 TRAF4Q9BUZ4 470 aaPredicted RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 KATNB1Q9BVA0 655 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 C1QTNF6Q9BXI9 259 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 NDEL1Q9GZM8 345 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 FAM107BQ9H098 131 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 DENND2DQ9H6A0 471 aaPredicted RBP8.94□□□□□ -0.98
CCM2-208ENST00000476594 CRLF2Q9HC73 371 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 GPR35Q9HC97 309 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 SEC14L4Q9UDX3 406 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 USP22Q9UPT9 525 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 MED31Q9Y3C7 131 aa8.94□□□□□ -0.98
CCM2-208ENST00000476594 CADP27708 2225 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 SLC35F4A4IF30 521 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 GMNCA6NCL1 334 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 C11orf98E9PRG8 122 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 MS4A18H0YCH9 400 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 M0R3G1 203 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 OVOL3O00110 214 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 KPNA4O00629 521 aaPredicted RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 FARS2O95363 451 aaKnown RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 BCL10O95999 233 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 MT-ND1P03886 318 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 SOD3P08294 240 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 APOBEC3AP31941 199 aaPredicted RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 DAP3P51398 398 aaKnown RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 SLC7A2P52569 658 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 DSCR9P59020 149 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 ARF1P84077 181 aaKnown RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 LIPEQ05469 1076 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 RAB35Q15286 201 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 PGGHGQ32M88 737 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 MS4A18Q3C1V0 323 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 CARD17Q5XLA6 110 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 FKBP9P1Q75LS8 142 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 SLC35D2Q76EJ3 337 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 RRM2BQ7LG56 351 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 RBM45Q8IUH3 476 aaKnown RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 C20orf196Q8IYI0 205 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 CDK20Q8IZL9 346 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 TMEM123Q8N131 208 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 OR6X1Q8NH79 312 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 TMEM239Q8WW34 195 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 IGFBPL1Q8WX77 278 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 GEMIN6Q8WXD5 167 aaKnown RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 BCL2L2Q92843 193 aaPredicted RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 NEUROG1Q92886 237 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 ZNF566Q969W8 418 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 FAM162AQ96A26 154 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 SGTBQ96EQ0 304 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 MOGAT1Q96PD6 335 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 KCTD14Q9BQ13 255 aaPredicted RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 ZNF426Q9BUY5 554 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 RSPO3Q9BXY4 272 aaPredicted RBP8.93□□□□□ -0.98
CCM2-208ENST00000476594 SPAG4Q9NPE6 437 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 DLL4Q9NR61 685 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 MED29Q9NX70 200 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 NDE1Q9NXR1 346 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 RIMS3Q9UJD0 308 aa8.93□□□□□ -0.98
CCM2-208ENST00000476594 RPS6KA6Q9UK32 745 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms