RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 POLDIP3Q9BY77 421 aaKnown RBP13.93□□□□□ -0.18
CPSF3-203ENST00000475482 YTHDF1Q9BYJ9 559 aaKnown RBP13.93□□□□□ -0.18
CPSF3-203ENST00000475482 NDEL1Q9GZM8 345 aa13.93□□□□□ -0.18
CPSF3-203ENST00000475482 CLEC4MQ9H2X3 399 aaPredicted RBP13.93□□□□□ -0.18
CPSF3-203ENST00000475482 IMPAD1Q9NX62 359 aa13.93□□□□□ -0.18
CPSF3-203ENST00000475482 PAQR5Q9NXK6 330 aaPredicted RBP13.93□□□□□ -0.18
CPSF3-203ENST00000475482 REV1Q9UBZ9 1251 aa13.93□□□□□ -0.18
CPSF3-203ENST00000475482 ITGB1BP2Q9UKP3 347 aa13.93□□□□□ -0.18
CPSF3-203ENST00000475482 FREM1Q5H8C1 2179 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 UNC119BA6NIH7 251 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 EFCAB9A8MZ26 197 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 ETV2O00321 342 aaPredicted RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 EFNA2O43921 213 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 NTN1O95631 604 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 GNAO1P09471 354 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 SAGP10523 405 aaPredicted RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 CD8BP10966 210 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 IL11P20809 199 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 POU1F1P28069 291 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 ADH6P28332 368 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 GGT2P36268 569 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 APOBEC1P41238 236 aaKnown RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 SLC9A3P48764 834 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 PTGES3Q15185 160 aaKnown RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 WDR88Q6ZMY6 472 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 ESPNLQ6ZVH7 1005 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 CDC20BQ86Y33 519 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 OR10D3Q8NH80 312 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 ZNF524Q96C55 264 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 SGTBQ96EQ0 304 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 SPIN1Q9Y657 262 aaPredicted RBP13.92□□□□□ -0.18
CPSF3-203ENST00000475482 PRR14LQ5THK1 2151 aa13.92□□□□□ -0.18
CPSF3-203ENST00000475482 MTORP42345 2549 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 A0A0J9YW62 118 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 ZAR1LA6NP61 321 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 KPNA4O00629 521 aaPredicted RBP13.91□□□□□ -0.18
CPSF3-203ENST00000475482 EIF1AYO14602 144 aaKnown RBP13.91□□□□□ -0.18
CPSF3-203ENST00000475482 KLF4O43474 513 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 FCGR2AP12318 317 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 ELK4P28324 431 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 POLR2IP36954 125 aaKnown RBP13.91□□□□□ -0.18
CPSF3-203ENST00000475482 GPR4P46093 362 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 IL5RAQ01344 420 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 TOP3AQ13472 1001 aaPredicted RBP13.91□□□□□ -0.18
CPSF3-203ENST00000475482 ANKDD1AQ495B1 522 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 SLC25A53Q5H9E4 307 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 UGT2A3Q6UWM9 527 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 CASP12Q6UXS9 341 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 FAM214BQ7L5A3 538 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 OR52L1Q8NGH7 329 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 PFN4Q8NHR9 129 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 SMPDL3BQ92485 455 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 MRGPRX4Q96LA9 322 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 CXXC4Q9H2H0 198 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 LIME1Q9H400 295 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 SERINC1Q9NRX5 453 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 BLOC1S6Q9UL45 172 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 MYRFQ9Y2G1 1151 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 CDH10Q9Y6N8 788 aa13.91□□□□□ -0.18
CPSF3-203ENST00000475482 MAP1AP78559 2803 aaPredicted RBP13.91□□□□□ -0.18
CPSF3-203ENST00000475482 SH3D21A4FU49 640 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 A8MVM7 634 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 E9PQ18 207 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 PIP5K1CO60331 668 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 CLIC3O95833 236 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 HRGP04196 525 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 PRKCAP17252 672 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 CD79BP40259 229 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 EIF1AXP47813 144 aaKnown RBP13.9□□□□□ -0.18
CPSF3-203ENST00000475482 CSNK2BP67870 215 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 TEKQ02763 1124 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 FAM27E3Q08E93 113 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 FOXF1Q12946 379 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 TOMM34Q15785 309 aaPredicted RBP13.9□□□□□ -0.18
CPSF3-203ENST00000475482 SGCBQ16585 318 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 SLX4IPQ5VYV7 408 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 SLC27A4Q6P1M0 643 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 OAFQ86UD1 273 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 CNEP1R1Q8N9A8 125 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 OR2V1Q8NHB1 315 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 FAM81AQ8TBF8 368 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 TRUB1Q8WWH5 349 aaKnown RBP13.9□□□□□ -0.18
CPSF3-203ENST00000475482 PLEKHF2Q9H8W4 249 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 MEPEQ9NQ76 525 aaPredicted RBP13.9□□□□□ -0.18
CPSF3-203ENST00000475482 PLSCR4Q9NRQ2 329 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 TBC1D23Q9NUY8 699 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 ELOVL5Q9NYP7 299 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 IL20Q9NYY1 176 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 UBAP1Q9NZ09 502 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 ST6GALNAC2Q9UJ37 374 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 OSGIN1Q9UJX0 560 aa13.9□□□□□ -0.18
CPSF3-203ENST00000475482 ROS1P08922 2347 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 A0A1W2PPR1 153 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 OR2T1O43869 369 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 CXCL13O43927 109 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 SS18L1O75177 396 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms