RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MPZL1O95297 269 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 HLA-HP01893 362 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 BPGMP07738 259 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 ZNF14P17017 642 aaPredicted RBP10.8□□□□□ -0.68
SKA3-206ENST00000475251 LBPP18428 481 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 SEC24CP53992 1094 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 NKPD1Q17RQ9 610 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 PCGF3Q3KNV8 242 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 GLIPR1L2Q4G1C9 344 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 FAM69AQ5T7M9 428 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 RBMS3Q6XE24 437 aaKnown RBP10.8□□□□□ -0.68
SKA3-206ENST00000475251 ZNF813Q6ZN06 617 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 CARM1Q86X55 608 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 VRK2Q86Y07 508 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 TREML1Q86YW5 311 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 UEVLDQ8IX04 471 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 SNX33Q8WV41 574 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 SLC38A4Q969I6 547 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 YIPF5Q969M3 257 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 LRR1Q96L50 414 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 PPP1R36Q96LQ0 422 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 OR2M2Q96R28 347 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 PTDSS2Q9BVG9 487 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 C12orf10Q9HB07 376 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 THUMPD1Q9NXG2 353 aaKnown RBP10.8□□□□□ -0.68
SKA3-206ENST00000475251 B3GAT1Q9P2W7 334 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 DUSP13Q9UII6 198 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 ZNF443Q9Y2A4 671 aaPredicted RBP10.8□□□□□ -0.68
SKA3-206ENST00000475251 POFUT2Q9Y2G5 429 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 PCDHGB1Q9Y5G3 927 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 DSPPQ9NZW4 1301 aa10.8□□□□□ -0.68
SKA3-206ENST00000475251 MGAM2Q2M2H8 2515 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 SLC22A23A1A5C7 686 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 WNT9BO14905 357 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 FZD7O75084 574 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 ENTPD5O75356 428 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 RP2O75695 350 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 SEC14L2O76054 403 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 UBL3O95164 117 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 NAT2P11245 290 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 PTDSS1P48651 473 aaKnown RBP10.79□□□□□ -0.68
SKA3-206ENST00000475251 MFSD13AQ14CX5 517 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 FXNQ16595 210 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 PDCD4Q53EL6 469 aaKnown RBP10.79□□□□□ -0.68
SKA3-206ENST00000475251 DCAF12L2Q5VW00 463 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 TMEM154Q6P9G4 183 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
SKA3-206ENST00000475251 H1FNTQ75WM6 255 aaPredicted RBP10.79□□□□□ -0.68
SKA3-206ENST00000475251 ZNF627Q7L945 461 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 C20orf196Q8IYI0 205 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 TMEM123Q8N131 208 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 SLC35B4Q969S0 331 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 ZNF837Q96EG3 531 aaPredicted RBP10.79□□□□□ -0.68
SKA3-206ENST00000475251 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 OR52E6Q96RD3 313 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 SLC6A7Q99884 636 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 SPATA9Q9BWV2 254 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 TMPRSS13Q9BYE2 586 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 ZMAT3Q9HA38 289 aaKnown RBP10.79□□□□□ -0.68
SKA3-206ENST00000475251 RPS6KB2Q9UBS0 482 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 IFT52Q9Y366 437 aa10.79□□□□□ -0.68
SKA3-206ENST00000475251 M0R082 166 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 PLPP2O43688 288 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 TRAF3IP2O43734 574 aaPredicted RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 SPAG7O75391 227 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 NCR1O76036 304 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 AVPP01185 164 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 MT-ND5P03915 603 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 HKR1P10072 659 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 PRG2P13727 222 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 RAD52P43351 418 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 RAB1AP62820 205 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 UBA52P62987 128 aaKnown RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 EGR4Q05215 589 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 PIGFQ07326 219 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 CAMK2DQ13557 499 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 MAD2L1BPQ15013 274 aaPredicted RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 CHI3L2Q15782 390 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 MSMPQ1L6U9 139 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 COX20Q5RI15 118 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 RGS7BPQ6MZT1 257 aaPredicted RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 SERPINA11Q86U17 422 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 LSRQ86X29 649 aaPredicted RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 NUDCD3Q8IVD9 361 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 LRRC17Q8N6Y2 441 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 ZNF781Q8N8C0 355 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 ZDHHC22Q8N966 263 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 ZNF417Q8TAU3 575 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 PNPT1Q8TCS8 783 aaKnown RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.78□□□□□ -0.68
SKA3-206ENST00000475251 KTI12Q96EK9 354 aaPredicted RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 ZNF587Q96SQ5 575 aaPredicted RBP10.78□□□□□ -0.68
SKA3-206ENST00000475251 ZBTB18Q99592 522 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 SLCO1C1Q9NYB5 712 aa10.78□□□□□ -0.68
SKA3-206ENST00000475251 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms