RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 BGLAPP02818 100 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 ERCC1P07992 297 aaPredicted RBP12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 H2AFXP16104 143 aaPredicted RBP12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 CDH12P55289 794 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 IL1RL1Q01638 556 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 ZP4Q12836 540 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 NFYCQ13952 458 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 CEACAM16Q2WEN9 425 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 GLIPR1L2Q4G1C9 344 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 NHLRC1Q6VVB1 395 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 CCDC80Q76M96 950 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 LINGO2Q7L985 606 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 C10orf111Q8N326 155 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 RNF217Q8TC41 542 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 POLR2J2Q9GZM3 115 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 PCDHAC1Q9H158 963 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 POLR2J3Q9H1A7 115 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 TMEM160Q9NX00 188 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 SPEF1Q9Y4P9 236 aa12.21□□□□□ -0.45
DNMT3A-211ENST00000474887 IGHV4-30-2A0A087WSY4 118 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 TRAPPC13A5PLN9 417 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 HTR3EA5X5Y0 456 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 A8MV72 311 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PLPP3O14495 311 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 IFNA14P01570 189 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 CECR9P0C854 216 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PTNP21246 168 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 USF1P22415 310 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 AQP1P29972 269 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PCGF2P35227 344 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PPOXP50336 477 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PDLIM4P50479 330 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 POU3F1Q03052 451 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 DUSP7Q16829 419 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 TTC33Q6PID6 262 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 DPPA2Q7Z7J5 298 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 COMTD1Q86VU5 262 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PRIMA1Q86XR5 153 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 C10orf53Q8N6V4 93 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 SLC26A7Q8TE54 656 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 FBXO17Q96EF6 278 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 RAB1BQ9H0U4 201 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 PLK3Q9H4B4 646 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 YAE1D1Q9NRH1 226 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 POFUT2Q9Y2G5 429 aa12.2□□□□□ -0.46
DNMT3A-211ENST00000474887 A0A096LNT2 108 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 A0A096LPE4 126 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 A0A0G2JND7 137 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 A0A1W2PPZ6 126 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 LOC390937A0A1W2PQ73 354 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 SLC35F4A4IF30 521 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 BBIP1A8MTZ0 92 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 TPST2O60704 377 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 IGF2P01344 180 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 OR4A8P0C604 315 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 NPR2P20594 1047 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 EVX1P49640 407 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 LGALS3BPQ08380 585 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 MAPRE2Q15555 327 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 NPTX1Q15818 432 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 ADIPOQQ15848 244 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 VMACQ2NL98 169 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 TMEM249Q2WGJ8 235 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 TRMT5Q32P41 509 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 ERICH5Q6P6B1 374 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 PODNL1Q6PEZ8 512 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 PIWIL3Q7Z3Z3 882 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 RETREG3Q86VR2 466 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 SMYD1Q8NB12 490 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 OR8J3Q8NGG0 315 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 OR6N1Q8NGY5 312 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 OR6X1Q8NH79 312 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 NEU4Q8WWR8 484 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 PRR14Q9BWN1 585 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 NPHS2Q9NP85 383 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 B3GNT2Q9NY97 397 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 ZNF229Q9UJW7 825 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 BAG5Q9UL15 447 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 AP3M1Q9Y2T2 418 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 MXRA5Q9NR99 2828 aa12.19□□□□□ -0.46
DNMT3A-211ENST00000474887 CENPBD1B2RD01 187 aa12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 M0R3G1 203 aa12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 CD247P20963 164 aa12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 AHCYP23526 432 aa12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 GZMKP49863 264 aa12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 MTPNP58546 118 aa12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
DNMT3A-211ENST00000474887 CHRFAM7AQ494W8 412 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms