RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZNF239Q16600 458 aaKnown RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 OCLNQ16625 522 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 PLEKHN1Q494U1 663 aaPredicted RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 KCTD21Q4G0X4 260 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 KLHL22Q53GT1 634 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 KRTCAP3Q53RY4 240 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ARMC4Q5T2S8 1044 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 NXNL2Q5VZ03 156 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 VASNQ6EMK4 673 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 PLBD1Q6P4A8 553 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 GGNQ86UU5 652 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 CPOQ8IVL8 374 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 FAM26EQ8N5C1 309 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ARIH2OSQ8N7S6 290 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 EXD3Q8N9H8 876 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 PROKR2Q8NFJ6 384 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 OR2T4Q8NH00 348 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 RHOXF1Q8NHV9 184 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 MRPL48Q96GC5 212 aaKnown RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 Q96M85 177 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 MYCBPQ99417 103 aaPredicted RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 SF3B5Q9BWJ5 86 aaKnown RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC25A18Q9H1K4 315 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 OR51V1Q9H2C8 321 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 B3GAT2Q9NPZ5 323 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ASB6Q9NWX5 421 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 TAS2R5Q9NYW4 299 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 KLHL13Q9P2N7 655 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 SEC14L4Q9UDX3 406 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF346Q9UL40 294 aaKnown RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 LIPGQ9Y5X9 500 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 A0A087WXM4 84 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC22A20A6NK97 555 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 PTGES3LE9PB15 166 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 RGS10O43665 173 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 ENTPD6O75354 484 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 TXNDC12O95881 172 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 HLA-DQA2P01906 255 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 LYNP07948 512 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CPN1P15169 458 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 MYL12AP19105 171 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CRABP1P29762 137 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 AGFG1P52594 562 aaKnown RBP9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 BLVRAP53004 296 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 NUDT6P53370 316 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 BIDP55957 195 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CLDN17P56750 224 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CLDN18P56856 261 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 FXYD6P3P58550 94 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 RASGEF1BQ0VAM2 473 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 C19orf57Q0VDD7 668 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 POU4F2Q12837 409 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CRMP1Q14194 572 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 PON3Q15166 354 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 RNPS1Q15287 305 aaKnown RBP9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CTU2Q2VPK5 515 aaKnown RBP9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 NADK2Q4G0N4 442 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 UGT2A3Q6UWM9 527 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 AHSA2Q719I0 299 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 KDM8Q8N371 416 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 CYB561A3Q8NBI2 242 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC37A3Q8NCC5 494 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 OR9K2Q8NGE7 335 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 OR6K6Q8NGW6 343 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 OR6N1Q8NGY5 312 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF566Q969W8 418 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 GPR137Q96N19 417 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 TSPAN32Q96QS1 320 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 RBP7Q96R05 134 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 NMNAT3Q96T66 252 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 TIMP4Q99727 224 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 COPS4Q9BT78 406 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 RPRD1BQ9NQG5 326 aaKnown RBP9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF226Q9NYT6 803 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 UBAP1Q9NZ09 502 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 PCDHGB1Q9Y5G3 927 aa9.19□□□□□ -0.94
PRPF38A-202ENST00000474048 A0A1B0GTH9 108 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 FAM183AA6NL82 134 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 FIGNL2A6NMB9 653 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 MS4A18H0YCH9 400 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 K7EM74 188 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ERVH48-1M5A8F1 160 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SMAD9O15198 467 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 AHCYL1O43865 530 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC43A1O75387 559 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 FADS2O95864 444 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TPOP07202 933 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TSPAN19P0C672 248 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 GABRA1P14867 456 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 HTR1FP30939 366 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 PTGS2P35354 604 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 MTNR1AP48039 350 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SUCLG1P53597 346 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 CASP6P55212 293 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TMED1Q13445 227 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 APOFQ13790 326 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 POU4F3Q15319 338 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms