RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KLF3P57682 345 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 DLK1P80370 383 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 PRKCZQ05513 592 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 PTGES3Q15185 160 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 KCNA10Q16322 511 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTBL2Q562R1 376 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 NCBP2-AS2Q69YL0 99 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 DRAM2Q6UX65 266 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SSX7Q7RTT5 188 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF551Q7Z340 670 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 TIPARPQ7Z3E1 657 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF664Q8N3J9 261 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR51S1Q8NGJ8 323 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 RHEBL1Q8TAI7 183 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 NUBPLQ8TB37 319 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 MYEOVQ96EZ4 313 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTL8Q9H568 366 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ALG9Q9H6U8 611 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 PLEKHA1Q9HB21 404 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 CISHQ9NSE2 258 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GPATCH2LQ9NWQ4 482 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 WRAP73Q9P2S5 460 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 CACFD1Q9UGQ2 172 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ALPK3Q96L96 1907 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ARRDC5A6NEK1 342 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR52A4PA6NMU1 304 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 C9J4A7 227 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ANHXE9PGG2 379 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SULT2B1O00204 365 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ARPC1BO15143 372 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 KDELR3O43731 214 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 DIRAS1O95057 198 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 WISP3O95389 354 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 WNT1P04628 370 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 IFNA6P05013 189 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 MYF5P13349 255 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 HLA-DPA1P20036 260 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 KDELR2P33947 212 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC1A2P43004 574 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 DHPSP49366 369 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 NDUFV1P49821 464 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ERVFC1-1P60608 527 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 MAXP61244 160 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 STXBP1P61764 594 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SIM1P81133 766 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 DUSP8Q13202 625 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GTF2H2Q13888 395 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC5A12Q1EHB4 618 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SYPL2Q5VXT5 272 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR8G2PQ6IF36 304 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 GTF2H2CQ6P1K8 395 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 FAHD2BQ6P2I3 314 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 WDR73Q6P4I2 378 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 PSRC1Q6PGN9 363 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 IL20RBQ6UXL0 311 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 NHLRC1Q6VVB1 395 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 PID1Q7Z2X4 250 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 LHFPL4Q7Z7J7 247 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF546Q86UE3 836 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 MARCH9Q86YJ5 346 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZBTB2Q8N680 514 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ACBD7Q8N6N7 88 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ARIH2OSQ8N7S6 290 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SAMD12Q8N8I0 201 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 BOLLQ8N9W6 283 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 AQP11Q8NBQ7 271 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR13D1Q8NGV5 346 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 HAVCR2Q8TDQ0 301 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SMIM4Q8WVI0 70 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR8D1Q8WZ84 308 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 RNFT2Q96EX2 444 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 NUDT11Q96G61 164 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 FAHD2AQ96GK7 314 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2M4Q96R27 311 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF382Q96SR6 550 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF471Q9BX82 626 aaPredicted RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2AG1Q9H205 316 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 EXO5Q9H790 373 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 NOX3Q9HBY0 568 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 IL26Q9NPH9 171 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SERGEFQ9UGK8 458 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 TRMT112Q9UI30 125 aaKnown RBP4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC25A13Q9UJS0 675 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 ZFP30Q9Y2G7 519 aa4.69□□□□□ -1.66
TMEM39A-206ENST00000473684 SCO2A0A1W2PP80 73 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 RNF222A6NCQ9 220 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 NKX6-3A6NJ46 265 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 RNASEK-C17orf49H0YIS7 233 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 HNRNPDLO14979 420 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 FRS3O43559 492 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10H3O60404 316 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 FMO6PO60774 539 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 GOSR1O95249 250 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 BCHEP06276 602 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ANKRD34CP0C6C1 535 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC25A4P12235 298 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF28P17035 718 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 TYRP1P17643 537 aa4.68□□□□□ -1.66
TMEM39A-206ENST00000473684 BCKDHBP21953 392 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms