RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 LAMP5Q9UJQ1 280 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 MRTO4Q9UKD2 239 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 MUC22E2RYF6 1773 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 A0A0B4J203 849 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 LOC100289279A0A1B0GTE1 492 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SLC22A23A1A5C7 686 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SYNDIG1LA6NDD5 238 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ELOA3DA6NLF2 546 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 PEX12O00623 359 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 HPP00738 406 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 APODP05090 189 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 CEACAM5P06731 702 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 CLUP10909 449 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 PTGER1P34995 402 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 METAP1P53582 386 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 EIF5AP63241 154 aaKnown RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 DBPQ10586 325 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 ELOA3BQ3SY89 546 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 STEAP1BQ6NZ63 245 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 FIGNL1Q6PIW4 674 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 FIGLAQ6QHK4 219 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 VITQ6UXI7 678 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 GRASPQ7Z6J2 395 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 TAF8Q7Z7C8 310 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 C12orf40Q86WS4 652 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 BEST3Q8N1M1 668 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ELOA3Q8NG57 546 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ZCCHC10Q8TBK6 192 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 RIT1Q92963 219 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 CCDC74AQ96AQ1 378 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SLC38A3Q99624 504 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 APOOQ9BUR5 198 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 ENKD1Q9H0I2 346 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 SLC25A18Q9H1K4 315 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 C1orf198Q9H425 327 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 WDR76Q9H967 626 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 TAS2R3Q9NYW6 316 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 PCOLCE2Q9UKZ9 415 aa5.6□□□□□ -1.51
HERC4-209ENST00000473533 PCYT1BQ9Y5K3 369 aaPredicted RBP5.6□□□□□ -1.51
HERC4-209ENST00000473533 HEATR5BQ9P2D3 2071 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 MDC1Q14676 2089 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 TRBV5-7A0A0A0MS05 114 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 C2orf74A8MZ97 194 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PYCARD-AS1I3L0S3 204 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 NDUFA2O43678 99 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FKTNO75072 461 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 TXNDC12O95881 172 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PAK4O96013 591 aaPredicted RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 CD8AP01732 235 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 LPLP06858 475 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PEBP1P30086 187 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 SDHAP31040 664 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 DCTDP32321 178 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 SRSF4Q08170 494 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 RUNX2Q13950 521 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FAM189A2Q15884 450 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 ITPRIPL2Q3MIP1 535 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 TRMT12Q53H54 448 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 FCRLBQ6BAA4 426 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 WBP2NLQ6ICG8 309 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 RAB12Q6IQ22 244 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FDX2Q6P4F2 183 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 LEG1Q6P5S2 330 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 CFAP77Q6ZQR2 320 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 NDUFAF7Q7L592 441 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 ZNF546Q86UE3 836 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 SVBPQ8N300 66 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 KCNRGQ8N5I3 272 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 OR4C16Q8NGL9 310 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 ST8SIA2Q92186 375 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FOXRED1Q96CU9 486 aaPredicted RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 WBP1Q96G27 269 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 OR2A5Q96R48 311 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PRRT1Q99946 306 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 CA10Q9NS85 328 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 SPHK1Q9NYA1 384 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 ATPIF1Q9UII2 106 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 IKZF2Q9UKS7 526 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 KCNK7Q9Y2U2 307 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 TMEM82A0PJX8 343 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 SLC17A2O00624 439 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PIN1P1O15428 100 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 BCL2L11O43521 198 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 ZFPL1O95159 310 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 NTN1O95631 604 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 APOC3P02656 99 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 STATHP02808 62 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PRKACAP17612 351 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PSMB10P40306 273 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 CLDN2P57739 230 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 RPS4XP62701 263 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 HTRA4P83105 476 aaPredicted RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 CYCSP99999 105 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 TCEAL5Q5H9L2 206 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 ZNF684Q5T5D7 378 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FAHD2BQ6P2I3 314 aaPredicted RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 KCTD18Q6PI47 426 aaPredicted RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 INO80EQ8NBZ0 244 aaPredicted RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 OR1S1Q8NH92 325 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 THAP6Q8TBB0 222 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms