RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 RABEP2Q9H5N1 569 aa14.47□□□□□ -0.09
USP40-212ENST00000473191 LOC102725191A0A1B0GVB3 256 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 OR6C65A6NJZ3 312 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 C11orf98E9PRG8 122 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 PLPP3O14495 311 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 OR4A8P0C604 315 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 NPRL3Q12980 569 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 PMS2P3Q13401 168 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 MSMPQ1L6U9 139 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 TMEM249Q2WGJ8 235 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 RABL3Q5HYI8 236 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 C5orf46Q6UWT4 87 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.09
USP40-212ENST00000473191 C10orf53Q8N6V4 93 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 LRRC17Q8N6Y2 441 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 ADPRHL1Q8NDY3 354 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 STON2Q8WXE9 905 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 FAM168AQ92567 244 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 TMEM120AQ9BXJ8 343 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 VIPAS39Q9H9C1 493 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 MRPL39Q9NYK5 338 aaKnown RBP14.46□□□□□ -0.09
USP40-212ENST00000473191 ZNF224Q9NZL3 707 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 SLC13A4Q9UKG4 626 aa14.46□□□□□ -0.09
USP40-212ENST00000473191 FBN1P35555 2871 aaKnown RBP14.46□□□□□ -0.1
USP40-212ENST00000473191 SVEP1Q4LDE5 3571 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 ABCA1O95477 2261 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 KPNA4O00629 521 aaPredicted RBP14.45□□□□□ -0.1
USP40-212ENST00000473191 F12P00748 615 aaPredicted RBP14.45□□□□□ -0.1
USP40-212ENST00000473191 HLA-HP01893 362 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 CRYAAP02489 173 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 TP53P04637 393 aaPredicted RBP14.45□□□□□ -0.1
USP40-212ENST00000473191 IGFBP1P08833 259 aaPredicted RBP14.45□□□□□ -0.1
USP40-212ENST00000473191 CBR1P16152 277 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 TNFRSF1BP20333 461 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 AHCYP23526 432 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 THBS4P35443 961 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 SERPINF1P36955 418 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 EFNA4P52798 201 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 RANBP3LQ86VV4 465 aaPredicted RBP14.45□□□□□ -0.1
USP40-212ENST00000473191 PIK3C3Q8NEB9 887 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 OR6S1Q8NH40 331 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 ADAMTS16Q8TE57 1224 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 MS4A3Q96HJ5 214 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 ZNF75AQ96N20 296 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 TNFRSF13CQ96RJ3 184 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 TMEM43Q9BTV4 400 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 ASPNQ9BXN1 380 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 SELENONQ9NZV5 590 aa14.45□□□□□ -0.1
USP40-212ENST00000473191 IGHV2OR16-5A0A0B4J2B6 119 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 ZNF99A8MXY4 864 aaPredicted RBP14.44□□□□□ -0.1
USP40-212ENST00000473191 FXYD1O00168 92 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 SHOX2O60902 331 aaPredicted RBP14.44□□□□□ -0.1
USP40-212ENST00000473191 PCGF2P35227 344 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 CAPZA2P47755 286 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 SH3BGRP55822 239 aaPredicted RBP14.44□□□□□ -0.1
USP40-212ENST00000473191 CHRNB3Q05901 458 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 PIGFQ07326 219 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 PUDPQ08623 228 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 RBBP4Q09028 425 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 C6orf52Q5T4I8 152 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 NANOGP8Q6NSW7 305 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 ZNF613Q6PF04 617 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 SCAIQ8N9R8 606 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 BHLHE22Q8NFJ8 381 aaPredicted RBP14.44□□□□□ -0.1
USP40-212ENST00000473191 FGFBP3Q8TAT2 258 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 EPYCQ99645 322 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 VRK1Q99986 396 aaPredicted RBP14.44□□□□□ -0.1
USP40-212ENST00000473191 KCNS3Q9BQ31 491 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 PRSS27Q9BQR3 290 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 NANOGQ9H9S0 305 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 B3GNT2Q9NY97 397 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 TAS2R5Q9NYW4 299 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 SLC7A7Q9UM01 511 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 TRIM33Q9UPN9 1127 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 CORINQ9Y5Q5 1042 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 PMF1-BGLAPU3KQ54 211 aa14.44□□□□□ -0.1
USP40-212ENST00000473191 TMEM129A0AVI4 362 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 VWC2LB2RUY7 222 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 CHP2O43745 196 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 TLX2O43763 284 aaPredicted RBP14.43□□□□□ -0.1
USP40-212ENST00000473191 CH25HO95992 272 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 PATE4P0C8F1 98 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 ADORA3P0DMS8 318 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 IFNGR1P15260 489 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 B4GALT1P15291 398 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 FUT4P22083 530 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 BIDP55957 195 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 LOXL1Q08397 574 aaPredicted RBP14.43□□□□□ -0.1
USP40-212ENST00000473191 MELKQ14680 651 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 MFSD13AQ14CX5 517 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 ZNF74Q16587 644 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 VMACQ2NL98 169 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 C3orf36Q3SXR2 165 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 C1QTNF12Q5T7M4 302 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 KRT80Q6KB66 452 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 SVOPLQ8N434 492 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 ANKK1Q8NFD2 765 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 OR5J2Q8NH18 312 aa14.43□□□□□ -0.1
USP40-212ENST00000473191 ZNF317Q96PQ6 595 aaPredicted RBP14.43□□□□□ -0.1
USP40-212ENST00000473191 PLK3Q9H4B4 646 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms