RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NUDCD3Q8IVD9 361 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 C12orf56Q8IXR9 622 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 SAXO1Q8IYX7 474 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 ZADH2Q8N4Q0 377 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 VN1R2Q8NFZ6 395 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 OR1N2Q8NGR9 330 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 PYROXD1Q8WU10 500 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 SMARCD2Q92925 531 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 TRIM44Q96DX7 344 aaPredicted RBP3.34□□□□□ -1.87
CLK1-209ENST00000472679 ZNF641Q96N77 438 aaPredicted RBP3.34□□□□□ -1.87
CLK1-209ENST00000472679 MS4A4EQ96PG1 132 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 TAAR1Q96RJ0 339 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 FAIM2Q9BWQ8 316 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 VCX2Q9H322 139 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 MCCC2Q9HCC0 563 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 PCYOX1Q9UHG3 505 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 CLEC4AQ9UMR7 237 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 F11RQ9Y624 299 aaKnown RBP3.34□□□□□ -1.87
CLK1-209ENST00000472679 FANCIQ9NVI1 1328 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
CLK1-209ENST00000472679 PEX7O00628 323 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 GKN3PP0CG01 181 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 DBTP11182 482 aaKnown RBP3.33□□□□□ -1.88
CLK1-209ENST00000472679 ERVK-25P63136 954 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 ACTA1P68133 377 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 IRX3P78415 501 aaPredicted RBP3.33□□□□□ -1.88
CLK1-209ENST00000472679 NCBP1Q09161 790 aaKnown RBP3.33□□□□□ -1.88
CLK1-209ENST00000472679 PMF1Q6P1K2 205 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 UBE2Q2Q8WVN8 375 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 DNAJC19Q96DA6 116 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 SLC41A3Q96GZ6 507 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 PSKH2Q96QS6 385 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 GPR61Q9BZJ8 451 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 PPA2Q9H2U2 334 aa3.33□□□□□ -1.88
CLK1-209ENST00000472679 B4GALT2O60909 372 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 WISP3O95389 354 aaPredicted RBP3.32□□□□□ -1.88
CLK1-209ENST00000472679 CLDN9O95484 217 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 IGHV3-43DP0DP04 118 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 LONP1P36776 959 aaKnown RBP3.32□□□□□ -1.88
CLK1-209ENST00000472679 NPBWR2P48146 333 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 ARFIP1P53367 373 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 SCRN3Q0VDG4 424 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 GPM6BQ13491 265 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 DGUOKQ16854 277 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 DEFB116Q30KQ4 102 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 CNIH2Q6PI25 160 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 Q8N976 141 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 STARD8Q92502 1023 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 PANX2Q96RD6 677 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 TRIM62Q9BVG3 475 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 ADAP2Q9NPF8 381 aa3.32□□□□□ -1.88
CLK1-209ENST00000472679 IGKV1D-13A0A0B4J2D9 117 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 A0A1B0GVL5 298 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 PLAC8L1A1L4L8 177 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 CCDC182A6NF36 153 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 TIMM8AO60220 97 aaPredicted RBP3.31□□□□□ -1.88
CLK1-209ENST00000472679 FCMRO60667 390 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 OR7A10O76100 309 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 CSF3P09919 207 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 IGKV1-13P0DP09 117 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 ZNF30P17039 623 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 HNMTP50135 292 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 SLAQ13239 276 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 EIF4EBP1Q13541 118 aaPredicted RBP3.31□□□□□ -1.88
CLK1-209ENST00000472679 ANKDD1AQ495B1 522 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 LYPD2Q6UXB3 125 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
CLK1-209ENST00000472679 TPRX1Q8N7U7 411 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 ACTRT1Q8TDG2 376 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 AURKBQ96GD4 344 aaPredicted RBP3.31□□□□□ -1.88
CLK1-209ENST00000472679 FMO2Q99518 471 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 GON7Q9BXV9 100 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 UGT1A7Q9HAW7 530 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 UGT1A10Q9HAW8 530 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 UGT1A8Q9HAW9 530 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 LHX9Q9NQ69 397 aa3.31□□□□□ -1.88
CLK1-209ENST00000472679 NOTCH2Q04721 2471 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 IGLV11-55A0A075B6I3 123 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 SNTNA6NMZ2 147 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 GPR89AB7ZAQ6 455 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 IL1BP01584 269 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 GPR89BP0CG08 455 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 ZNF823P16415 610 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 TFPI2P48307 235 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 GBX2P52951 348 aaPredicted RBP3.3□□□□□ -1.88
CLK1-209ENST00000472679 AIF1P55008 147 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 SMARCB1Q12824 385 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 IL24Q13007 206 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 CHIT1Q13231 466 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 GNMTQ14749 295 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 OR2A2Q6IF42 318 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 TRIM40Q6P9F5 258 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 UTS2BQ765I0 119 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 PPP1R42Q7Z4L9 355 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 LRRC75A-AS1Q8N1F1 130 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 OR1L4Q8NGR5 311 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 RIOK1Q9BRS2 568 aaKnown RBP3.3□□□□□ -1.88
CLK1-209ENST00000472679 IFI27L2Q9H2X8 130 aa3.3□□□□□ -1.88
CLK1-209ENST00000472679 NMRAL1Q9HBL8 299 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms