RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ANKRD46Q86W74 232 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 WDFY1Q8IWB7 410 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 TMEM123Q8N131 208 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 BCL6BQ8N143 479 aaPredicted RBP16.17■□□□□ 0.18
SORT1-203ENST00000471996 OR8J2Q8NGG1 315 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 STK35Q8TDR2 534 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 SLC25A36Q96CQ1 311 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 OR2M2Q96R28 347 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 DENND2DQ9H6A0 471 aaPredicted RBP16.17■□□□□ 0.18
SORT1-203ENST00000471996 MARCOQ9UEW3 520 aaPredicted RBP16.17■□□□□ 0.18
SORT1-203ENST00000471996 SLC7A8Q9UHI5 535 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 GPR160Q9UJ42 338 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 MMP24Q9Y5R2 645 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 WNK2Q9Y3S1 2297 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 PPIAL4EA0A075B759 164 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 PPIAL4CA0A0B4J2A2 164 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 PPIAL4DF5H284 164 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 M0R3G1 203 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 CPSF4O95639 269 aaKnown RBP16.16■□□□□ 0.18
SORT1-203ENST00000471996 DBIP07108 87 aaKnown RBP16.16■□□□□ 0.18
SORT1-203ENST00000471996 PPIAL4FP0DN26 164 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 GIPRP48546 466 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 COPZ1P61923 177 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 C1DQ13901 141 aaKnown RBP16.16■□□□□ 0.18
SORT1-203ENST00000471996 SLC9A3R2Q15599 337 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 ARMCX4Q5H9R4 360 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 RGS7BPQ6MZT1 257 aaPredicted RBP16.16■□□□□ 0.18
SORT1-203ENST00000471996 ZNF627Q7L945 461 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 DEFB108BQ8NET1 73 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 RAB1CQ92928 201 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 TIMD4Q96H15 378 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 PTDSS2Q9BVG9 487 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 ZNF224Q9NZL3 707 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 PDP1Q9P0J1 537 aaPredicted RBP16.16■□□□□ 0.18
SORT1-203ENST00000471996 SEC14L4Q9UDX3 406 aa16.16■□□□□ 0.18
SORT1-203ENST00000471996 PRSS51A0A1B0GVH4 220 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 CDHR4A6H8M9 788 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 RAB36O95755 333 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 CLPTM1O96005 669 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 LSP1P33241 339 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 CHI3L1P36222 383 aaPredicted RBP16.15■□□□□ 0.18
SORT1-203ENST00000471996 ATP4BP51164 291 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 SELENOVP59797 346 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 RAB1AP62820 205 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 SYT10Q6XYQ8 523 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 ZNF813Q6ZN06 617 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 USP51Q70EK9 711 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 AGR3Q8TD06 166 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 TMIGD2Q96BF3 282 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 GAL3ST1Q99999 423 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 MMP27Q9H306 513 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 MID2Q9UJV3 735 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 FBXL3Q9UKT7 428 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 CACNG2Q9Y698 323 aa16.15■□□□□ 0.18
SORT1-203ENST00000471996 IGLV3-9A0A075B6K5 115 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 COPEO14579 308 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 TRAF3IP2O43734 574 aaPredicted RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 AKAP8O43823 692 aaKnown RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 NPHS1O60500 1241 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 C1QCP02747 245 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 GTF2E2P29084 291 aaKnown RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 RPS5P46782 204 aaKnown RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 SRSF4Q08170 494 aaKnown RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 CHI3L2Q15782 390 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 HFEQ30201 348 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 KLF17Q5JT82 389 aaPredicted RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 C20orf196Q8IYI0 205 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 SNX33Q8WV41 574 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 TUBGCP3Q96CW5 907 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 TSPAN32Q96QS1 320 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 SLC35A5Q9BS91 424 aa16.14■□□□□ 0.17
SORT1-203ENST00000471996 LEF1Q9UJU2 399 aaPredicted RBP16.14■□□□□ 0.17
SORT1-203ENST00000471996 LOC102725191A0A1B0GVB3 256 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 SLC22A23A1A5C7 686 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 FZD7O75084 574 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 B4GALT1P15291 398 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 ZNF250P15622 560 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 AQP5P55064 265 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 KLF3P57682 345 aaPredicted RBP16.13■□□□□ 0.17
SORT1-203ENST00000471996 EMX2Q04743 252 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 EGR4Q05215 589 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 MAD2L1Q13257 205 aaPredicted RBP16.13■□□□□ 0.17
SORT1-203ENST00000471996 RAB39AQ14964 217 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 MFSD13AQ14CX5 517 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 ANXA8L1Q5VT79 327 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 ATG16L1Q676U5 607 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
SORT1-203ENST00000471996 RNF130Q86XS8 419 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 ZNF584Q8IVC4 421 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 PEX5LQ8IYB4 626 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 VPS37AQ8NEZ2 397 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 SYNPRQ8TBG9 265 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 LRR1Q96L50 414 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 DECR2Q9NUI1 292 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 ASIC5Q9NY37 505 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 SLCO1C1Q9NYB5 712 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 NOP53Q9NZM5 478 aaKnown RBP16.13■□□□□ 0.17
SORT1-203ENST00000471996 POFUT2Q9Y2G5 429 aa16.13■□□□□ 0.17
SORT1-203ENST00000471996 AIM2O14862 343 aa16.12■□□□□ 0.17
SORT1-203ENST00000471996 TPD52L2O43399 206 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms