RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GZMMP51124 257 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 MAP2K6P52564 334 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 TXNL4AP83876 142 aaKnown RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 VLDLRP98155 873 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 IL1RL1Q01638 556 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 TGFBR3Q03167 851 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 RUNX1T1Q06455 604 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 NPRL3Q12980 569 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 C1DQ13901 141 aaKnown RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 NRF1Q16656 503 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 KRTAP24-1Q3LI83 254 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 ALG10BQ5I7T1 473 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 KRT80Q6KB66 452 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 LRFN4Q6PJG9 635 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 KLHL24Q6TFL4 600 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 C6orf89Q6UWU4 347 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 DEPDC4Q8N2C3 294 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 C17orf78Q8N4C9 275 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 PAQR4Q8N4S7 273 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 GOLGA6L1Q8N7Z2 621 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 LSMEM1Q8N8F7 131 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 OR6T1Q8NGN1 323 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 SLC38A4Q969I6 547 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 TAMM41Q96BW9 452 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 SLC41A3Q96GZ6 507 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 C1orf159Q96HA4 380 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 ATP6V1G3Q96LB4 118 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 CCDC28BQ9BUN5 200 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 LINC00470Q9BZP3 86 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 PLK3Q9H4B4 646 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 FKRPQ9H9S5 495 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 BARX1Q9HBU1 254 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 TAS2R5Q9NYW4 299 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 RPS6KB2Q9UBS0 482 aa6.98□□□□□ -1.29
USP48-207ENST00000471752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.98□□□□□ -1.29
USP48-207ENST00000471752 CMYA5Q8N3K9 4069 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 OR6C65A6NJZ3 312 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CPSF4LA6NMK7 179 aaKnown RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 C11orf98E9PRG8 122 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 KPNA4O00629 521 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 POLR3GO15318 223 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 PHF1O43189 567 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 LILRA1O75019 489 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 SLC43A1O75387 559 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 ERLIN1O75477 346 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 ADRA2AP08913 450 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CCL2P13500 99 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 B4GALT1P15291 398 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 FUT1P19526 365 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CAPZA2P47755 286 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 PCBP3P57721 371 aaKnown RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 RGS8P57771 180 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 UBE2NP61088 152 aaKnown RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 POU3F1Q03052 451 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 FADDQ13158 208 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 MAD2L1BPQ15013 274 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 CHRFAM7AQ494W8 412 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 FAM69AQ5T7M9 428 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CYB5R2Q6BCY4 276 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 SPATA21Q7Z572 469 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CROCCP2Q86T23 111 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 MEX3DQ86XN8 651 aaKnown RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 ZNF584Q8IVC4 421 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 SKA3Q8IX90 412 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 KIRREL3Q8IZU9 778 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 SPATA3Q8NHX4 192 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 VANGL1Q8TAA9 524 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 MAGEE2Q8TD90 523 aaPredicted RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 LRRC8CQ8TDW0 803 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CKAP2Q8WWK9 683 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 GTF3AQ92664 365 aaKnown RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 CGREF1Q99674 301 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 MCHR1Q99705 422 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 ARHGDIGQ99819 225 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 MRPL37Q9BZE1 423 aaKnown RBP6.97□□□□□ -1.29
USP48-207ENST00000471752 BPESC1Q9GZL8 116 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 TPK1Q9H3S4 243 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 TMEM38AQ9H6F2 299 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 CHODLQ9H9P2 273 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 PMF1-BGLAPU3KQ54 211 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
USP48-207ENST00000471752 LOC100289279A0A1B0GTE1 492 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 LOC102725191A0A1B0GVB3 256 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 B9A039 149 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 hCG_2039718K7EN88 272 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 AIM2O14862 343 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 LMX1BO60663 402 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 TGDSO95455 350 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 STAMBPO95630 424 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 CH25HO95992 272 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 CLPTM1O96005 669 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 CRYAAP02489 173 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 HPXP02790 462 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 CD79AP11912 226 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ZNF35P13682 527 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 IFNGR1P15260 489 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 SLC25A16P16260 332 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ZNF14P17017 642 aaPredicted RBP6.96□□□□□ -1.3
USP48-207ENST00000471752 NPR2P20594 1047 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 AHCYP23526 432 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms