RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SIKE1Q9BRV8 207 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 OR2AG1Q9H205 316 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 Q9H3A6 140 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 CLN8Q9UBY8 286 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 KIF25Q9UIL4 384 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 COMMD3-BMI1R4GMX3 469 aa5.03□□□□□ -1.6
SMC5-202ENST00000471372 A0A087WWV3 80 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 RBMY1BA6NDE4 496 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 RBMY1EA6NEQ0 496 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 ZNF701M0R085 212 aaPredicted RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 HCRTR1O43613 425 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 SERPINE2P07093 398 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 RBMY1DP0C7P1 496 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 UBCP0CG48 685 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 RBMY1A1P0DJD3 496 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 TBPP20226 339 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 NUP62P37198 522 aaPredicted RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 MDH2P40926 338 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 SLC1A1P43005 524 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 TFPI2P48307 235 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 CX3CR1P49238 355 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 CRISP1P54107 249 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 PDIA2Q13087 525 aaKnown RBP5.02□□□□□ -1.61
SMC5-202ENST00000471372 C11orf71Q6IPW1 123 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 METTL7BQ6UX53 244 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 CERS6Q6ZMG9 384 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 LINC00523Q86TU6 105 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 EID2Q8N6I1 236 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 OR5B3Q8NH48 314 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 SLC7A13Q8TCU3 470 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 C19orf24Q9BVV8 132 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 SELENOIQ9C0D9 397 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 ROGDIQ9GZN7 287 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 GBA3Q9H227 469 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 XKR8Q9H6D3 395 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 TMEM165Q9HC07 324 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 KCNIP1Q9NZI2 227 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 UGT2A1Q9Y4X1 527 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 PCNX3Q9H6A9 2034 aa5.02□□□□□ -1.61
SMC5-202ENST00000471372 IGHV3OR16-13A0A075B7E8 117 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 KCNE1BA0A087WTH5 132 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 IGHV7-81A0A0B4J1V7 117 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 BCKDKO14874 412 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 TBL1XO60907 577 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 TGM6O95932 706 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 PLEKP08567 350 aaPredicted RBP5.01□□□□□ -1.61
SMC5-202ENST00000471372 FASP25445 335 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 U2AF2P26368 475 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMC5-202ENST00000471372 RORAP35398 523 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 MRPL19P49406 292 aaKnown RBP5.01□□□□□ -1.61
SMC5-202ENST00000471372 YWHAGP61981 247 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMC5-202ENST00000471372 TGFBR3Q03167 851 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 PAGE2BQ5JRK9 111 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 FAM220AQ7Z4H9 259 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 LHFPL3Q86UP9 236 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 CMTM1Q8IZ96 169 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 LIX1Q8N485 282 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 ZNF557Q8N988 423 aaPredicted RBP5.01□□□□□ -1.61
SMC5-202ENST00000471372 OR52E5Q8NH55 327 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 PIBF1Q8WXW3 757 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 CERS2Q96G23 380 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 ZNF184Q99676 751 aaPredicted RBP5.01□□□□□ -1.61
SMC5-202ENST00000471372 RARRES2Q99969 163 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 C20orf85Q9H1P6 137 aa5.01□□□□□ -1.61
SMC5-202ENST00000471372 POGZQ7Z3K3 1410 aa5□□□□□ -1.61
SMC5-202ENST00000471372 NDUFAB1O14561 156 aa5□□□□□ -1.61
SMC5-202ENST00000471372 SIVA1O15304 175 aa5□□□□□ -1.61
SMC5-202ENST00000471372 LYPLA1O75608 230 aaPredicted RBP5□□□□□ -1.61
SMC5-202ENST00000471372 CLPXO76031 633 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ALDOBP05062 364 aa5□□□□□ -1.61
SMC5-202ENST00000471372 KIR2DS4P43632 304 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ARRB1P49407 418 aaPredicted RBP5□□□□□ -1.61
SMC5-202ENST00000471372 KRTAP10-9P60411 292 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ERVK-25P63136 954 aa5□□□□□ -1.61
SMC5-202ENST00000471372 MECOMQ03112 1051 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ACVR1Q04771 509 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ZNF763Q0D2J5 394 aa5□□□□□ -1.61
SMC5-202ENST00000471372 EGFEM1PQ0D2K5 195 aa5□□□□□ -1.61
SMC5-202ENST00000471372 KLHL22Q53GT1 634 aa5□□□□□ -1.61
SMC5-202ENST00000471372 XKR4Q5GH76 650 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ANKRD26P1Q6NSI1 321 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ZNF589Q86UQ0 364 aaPredicted RBP5□□□□□ -1.61
SMC5-202ENST00000471372 ZNF677Q86XU0 584 aa5□□□□□ -1.61
SMC5-202ENST00000471372 KLHL30-AS1Q8NEE0 82 aa5□□□□□ -1.61
SMC5-202ENST00000471372 TOP1MTQ969P6 601 aa5□□□□□ -1.61
SMC5-202ENST00000471372 XPO6Q96QU8 1125 aaKnown RBP5□□□□□ -1.61
SMC5-202ENST00000471372 PELOQ9BRX2 385 aaKnown RBP5□□□□□ -1.61
SMC5-202ENST00000471372 HAUS4Q9H6D7 363 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ISG20L2Q9H9L3 353 aaKnown RBP5□□□□□ -1.61
SMC5-202ENST00000471372 BEX1Q9HBH7 125 aa5□□□□□ -1.61
SMC5-202ENST00000471372 RETNQ9HD89 108 aa5□□□□□ -1.61
SMC5-202ENST00000471372 MYEF2Q9P2K5 600 aaKnown RBP5□□□□□ -1.61
SMC5-202ENST00000471372 UXTQ9UBK9 157 aaPredicted RBP5□□□□□ -1.61
SMC5-202ENST00000471372 APOBEC3BQ9UH17 382 aaKnown RBP5□□□□□ -1.61
SMC5-202ENST00000471372 SLC17A4Q9Y2C5 497 aa5□□□□□ -1.61
SMC5-202ENST00000471372 ZNF256Q9Y2P7 627 aaPredicted RBP5□□□□□ -1.61
SMC5-202ENST00000471372 KIF26BQ2KJY2 2108 aa5□□□□□ -1.61
SMC5-202ENST00000471372 MROH7-TTC4A0A0A0MT08 1334 aa4.99□□□□□ -1.61
SMC5-202ENST00000471372 FAM231BA6NCW3 169 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms