RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 DENND2DQ9H6A0 471 aaPredicted RBP13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 MALT1Q9UDY8 824 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR6C65A6NJZ3 312 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR10H3O60404 316 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 MRPL33O75394 65 aaKnown RBP13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 DEAF1O75398 565 aaPredicted RBP13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF432O94892 652 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 CCNB2O95067 398 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 PRPS1P60891 318 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 SORDQ00796 357 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 C1DQ13901 141 aaKnown RBP13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ATP6AP1Q15904 470 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 MICAQ29983 383 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 PGBD2Q6P3X8 592 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF474Q6S9Z5 364 aaPredicted RBP13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 CASP12Q6UXS9 341 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 Q6ZT83 130 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 BEND4Q6ZU67 534 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 LUZP2Q86TE4 346 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF295-AS1Q8N0V1 137 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ACBD4Q8NC06 268 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR13C2Q8NGS9 318 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 C12orf49Q9H741 205 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 ELOVL5Q9NYP7 299 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 U3KQV3 271 aa13.22□□□□□ -0.29
CDC42SE1-203ENST00000470278 TRAV27A0A087WT01 109 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 BLOC1S5-TXNDC5H3BN57 136 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 C19orf84I3L1E1 186 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 GNGT2O14610 69 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 CLOCKO15516 846 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 RNF13O43567 381 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 TIPRLO75663 272 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 HLA-DOBP13765 273 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 IGFBP2P18065 325 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 AHCYP23526 432 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 EDNRAP25101 427 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 FASP25445 335 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 DNAJA1P31689 397 aaKnown RBP13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 PEX19P40855 299 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 AQP2P41181 271 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 GSSP48637 474 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 IL1RL1Q01638 556 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZBED5Q49AG3 693 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 ALG10Q5BKT4 473 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 AAED1Q7RTV5 226 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF100Q8IYN0 542 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 GABRG1Q8N1C3 465 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF610Q8N9Z0 462 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 OR9Q2Q8NGE9 314 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 ZNF775Q96BV0 537 aaPredicted RBP13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 ADAD1Q96M93 576 aaKnown RBP13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 GPA33Q99795 319 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 RBM24Q9BX46 236 aaKnown RBP13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 NDEL1Q9GZM8 345 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 GALNT8Q9NY28 637 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 SIGLEC7Q9Y286 467 aa13.21□□□□□ -0.29
CDC42SE1-203ENST00000470278 FREM1Q5H8C1 2179 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 C11orf98E9PRG8 122 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 IGHMP01871 453 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 COX5AP20674 150 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 CD79BP40259 229 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 SELENOPP49908 381 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 DAP3P51398 398 aaKnown RBP13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 CLDN17P56750 224 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 TSPAN31Q12999 210 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 P2RY6Q15077 328 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 TAF11Q15544 211 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 FBXW9Q5XUX1 488 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 HDDC2Q7Z4H3 204 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 TMEM123Q8N131 208 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 LRRC75AQ8NAA5 344 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 POMGNT2Q8NAT1 580 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 MOSPD2Q8NHP6 518 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 NRBF2Q96F24 287 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 OR2M2Q96R28 347 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 GPX7Q96SL4 187 aaPredicted RBP13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 LINC00470Q9BZP3 86 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 SLCO5A1Q9H2Y9 848 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 NTN4Q9HB63 628 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
CDC42SE1-203ENST00000470278 ANKHD1Q8IWZ3 2542 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 UNC119BA6NIH7 251 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 CENPBD1B2RD01 187 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 H3BNX3 289 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 PTP4A3O75365 173 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 E2F6O75461 281 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 ADAP00813 363 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 POU2F1P14859 743 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 IFNGR1P15260 489 aa13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 ZNF26P17031 533 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE1-203ENST00000470278 PSMB1P20618 241 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms