RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 GTPBP8Q8N3Z3 284 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FAM109AQ8N4B1 249 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR4K5Q8NGD3 323 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR14L1PQ8NHC6 308 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 DNAJA4Q8WW22 397 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM239Q8WW34 195 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ACOT11Q8WXI4 607 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM234Q8WY98 164 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PNPLA2Q96AD5 504 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TMIGD2Q96BF3 282 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 KTI12Q96EK9 354 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MRGPRX4Q96LA9 322 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MOGAT1Q96PD6 335 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 NR1H4Q96RI1 486 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MBOAT4Q96T53 435 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FEVQ99581 238 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 EPYCQ99645 322 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 NIPSNAP1Q9BPW8 284 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 BDH2Q9BUT1 245 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PTDSS2Q9BVG9 487 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 POLR2J2Q9GZM3 115 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 POLR2J3Q9H1A7 115 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SLC25A18Q9H1K4 315 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 DEFB127Q9H1M4 99 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR10A2Q9H208 303 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ADNPQ9H2P0 1102 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ANKRD19PQ9H560 264 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PDP1Q9P0J1 537 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 RPS6KB2Q9UBS0 482 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 DKKL1Q9UK85 242 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 RAB26Q9ULW5 256 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SLC6A5Q9Y345 797 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TMED7Q9Y3B3 224 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MRPS18CQ9Y3D5 142 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 HEATR5AQ86XA9 2040 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 PCNX3Q9H6A9 2034 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 NINQ8N4C6 2090 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 A0A087WZY1 265 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 G3V2T6 193 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 OR10H3O60404 316 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 E2F6O75461 281 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 ALPLP05186 524 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 TFAP2AP05549 437 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 POU2F1P14859 743 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF24P17028 368 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 KLK2P20151 261 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 MAKP20794 623 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CBLP22681 906 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CXCR1P25024 350 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 ELK4P28324 431 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 SFTPDP35247 375 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 APOBEC1P41238 236 aaKnown RBP4.23□□□□□ -1.73
SF3B1-208ENST00000470268 KIR2DL3P43628 341 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 GPR4P46093 362 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 GSSP48637 474 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CLK1P49759 484 aaKnown RBP4.23□□□□□ -1.73
SF3B1-208ENST00000470268 SUCLG1P53597 346 aaKnown RBP4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CLDN20P56880 219 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 FXYD6P3P58550 94 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 PPP2R2BQ00005 443 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 HSF1Q00613 529 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 PIGFQ07326 219 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 FHL1Q13642 323 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CTU2Q2VPK5 515 aaKnown RBP4.23□□□□□ -1.73
SF3B1-208ENST00000470268 C3orf36Q3SXR2 165 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 SLC36A3Q495N2 470 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 PGBD2Q6P3X8 592 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 Q6ZPB1 254 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-208ENST00000470268 MBOAT2Q6ZWT7 520 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 KRT77Q7Z794 578 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 SLC22A16Q86VW1 577 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 LRRC17Q8N6Y2 441 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 ATP6V1C2Q8NEY4 427 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 OR10G2Q8NGC3 310 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 OR5K1Q8NHB7 308 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 TAAR8Q969N4 342 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 MBD6Q96DN6 1003 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 MPP4Q96JB8 637 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 MUS81Q96NY9 551 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 OSBPL10Q9BXB5 764 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 TOR3AQ9H497 397 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 BCO1Q9HAY6 547 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 C12orf10Q9HB07 376 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 SPRR3Q9UBC9 169 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 SEC14L4Q9UDX3 406 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CHRNA9Q9UGM1 479 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 ACACBO00763 2458 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 NCKAP5O14513 1909 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 CNTRLQ7Z7A1 2325 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 RELNP78509 3460 aa4.23□□□□□ -1.73
SF3B1-208ENST00000470268 A0A0J9YW62 118 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TRIM64CA6NLI5 447 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 A8MVM7 634 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF814B7Z6K7 855 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 FTCDNL1E5RQL4 147 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 NPIPA5E9PKD4 350 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 TFECO14948 347 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-208ENST00000470268 CCNB2O95067 398 aa4.22□□□□□ -1.73
SF3B1-208ENST00000470268 IGHG3P01860 377 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms