RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CASC3O15234 703 aaKnown RBP2.53□□□□□ -2
BRCA2-202ENST00000470094 MBTPS2O43462 519 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 DNAJB6O75190 326 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 CA11O75493 328 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 OR7A10O76100 309 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 LGI1O95970 557 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 IGHV3-48P01763 117 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 FTH1P02794 183 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 OR8G3PP0DMU2 310 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 PSG2P11465 335 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 GZMAP12544 262 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 OTX1P32242 354 aaPredicted RBP2.53□□□□□ -2
BRCA2-202ENST00000470094 RFC4P35249 363 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 GSSP48637 474 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 KLK7P49862 253 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 TGFBIQ15582 683 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 ALKBH6Q3KRA9 238 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 VPS26BQ4G0F5 336 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 C11orf71Q6IPW1 123 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 SLC8B1Q6J4K2 584 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 IGFL3Q6UXB1 125 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 CENPQQ7L2Z9 268 aaPredicted RBP2.53□□□□□ -2
BRCA2-202ENST00000470094 NIPA1Q7RTP0 329 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 FTMTQ8N4E7 242 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 CCDC71LQ8N9Z2 235 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 DCAF4L2Q8NA75 395 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 B3GNT7Q8NFL0 401 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 OR7G2Q8NG99 324 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 OR2AP1Q8NGE2 309 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 PYROXD1Q8WU10 500 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 TSEN15Q8WW01 171 aaKnown RBP2.53□□□□□ -2
BRCA2-202ENST00000470094 FGF11Q92914 225 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 TSNARE1Q96NA8 513 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 C11orf70Q9BRQ4 267 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 GEMIN7Q9H840 131 aaKnown RBP2.53□□□□□ -2
BRCA2-202ENST00000470094 FOLH1BQ9HBA9 442 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 PSME2Q9UL46 239 aa2.53□□□□□ -2
BRCA2-202ENST00000470094 NACAE9PAV3 2078 aa2.53□□□□□ -2.01
BRCA2-202ENST00000470094 SMCO3A2RU48 225 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 NCF1BA6NI72 391 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 NCF1CA8MVU1 366 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 L7N2F9 121 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 GOSR2O14653 212 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 OR2J3O76001 311 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 H6PDO95479 791 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 FGF1P05230 155 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 KLK3P07288 261 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 UBTFL1P0CB47 393 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 CCNE1P24864 410 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 PRDX3P30048 256 aaKnown RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 IFNA8P32881 189 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 TNNT2P45379 298 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 GPM6AP51674 278 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 MERTKQ12866 999 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 MPPED2Q15777 294 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 Q6P435 159 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 SASS6Q6UVJ0 657 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 CLEC2AQ6UVW9 174 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 Q6ZSR3 168 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 EIF3MQ7L2H7 374 aaKnown RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 PRSS41Q7RTY9 318 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 OR6C4Q8NGE1 309 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 FAM81AQ8TBF8 368 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 PLPPR1Q8TBJ4 325 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 SLC22A8Q8TCC7 542 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 GPR151Q8TDV0 419 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 CMTM7Q96FZ5 175 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 SLC35E1Q96K37 410 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 TGS1Q96RS0 853 aaKnown RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 HIST1H4GQ99525 98 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 FAIM2Q9BWQ8 316 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 SLC25A39Q9BZJ4 359 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 SELENOIQ9C0D9 397 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-202ENST00000470094 GIN1Q9NXP7 522 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 GCNT4Q9P109 453 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 NUP50Q9UKX7 468 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 VANGL2Q9ULK5 521 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 N6AMT1Q9Y5N5 214 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 V9GY05 133 aa2.52□□□□□ -2.01
BRCA2-202ENST00000470094 NSG1A0A0A6YYJ2 146 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 A0A0J9YXY3 114 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 TRBV11-1A0A0K0K1C0 115 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 DLGAP1O14490 977 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 LSM1O15116 133 aaKnown RBP2.51□□□□□ -2.01
BRCA2-202ENST00000470094 SUPT7LO94864 414 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 OR2F2O95006 317 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 ATP6V1B2P21281 511 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 BTDP43251 543 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 RGS8P57771 180 aaPredicted RBP2.51□□□□□ -2.01
BRCA2-202ENST00000470094 IL18Q14116 193 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 TIGD3Q6B0B8 471 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 Q6ZN92 141 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 SCD5Q86SK9 330 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 ZNF546Q86UE3 836 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 SLC26A11Q86WA9 606 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 PIANPQ8IYJ0 282 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 MS4A15Q8N5U1 240 aa2.51□□□□□ -2.01
BRCA2-202ENST00000470094 COMMD1Q8N668 190 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms