RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TPST1O60507 370 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 ERCC1P07992 297 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 NQO1P15559 274 aaKnown RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 SLC6A2P23975 617 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 IGFBP5P24593 272 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 THBS4P35443 961 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 RGS8P57771 180 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 SCARB2Q14108 478 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 IQCCQ4KMZ1 466 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 PAGE3Q5JUK9 113 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 BEND6Q5SZJ8 279 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 MYPOPQ86VE0 399 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 SCAIQ8N9R8 606 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 LRRC8CQ8TDW0 803 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 NEU4Q8WWR8 484 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 MSI2Q96DH6 328 aaKnown RBP15.15■□□□□ 0.02
COL7A1-208ENST00000470076 LRR1Q96L50 414 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 SLC52A3Q9NQ40 469 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 SLC13A4Q9UKG4 626 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 A0A0B4J2E0 115 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 A0A1B0GX12 115 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 ZNF503-AS2A6NEH8 195 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 MS4A18H0YCH9 400 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 hCG_2039718K7EN88 272 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 M0R3G1 203 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 SERPINB7O75635 380 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 ZNF23P17027 643 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 GPX2P18283 190 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 CBLP22681 906 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 CAPZA2P47755 286 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 NPRL3Q12980 569 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 OR1Q1Q15612 314 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 MS4A18Q3C1V0 323 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 SWT1Q5T5J6 900 aaKnown RBP15.14■□□□□ 0.01
COL7A1-208ENST00000470076 AGBL2Q5U5Z8 902 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 MDP1Q86V88 176 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 C20orf196Q8IYI0 205 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 ARIH2OSQ8N7S6 290 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 RNF217Q8TC41 542 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 DOK1Q99704 481 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 ASPNQ9BXN1 380 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 BPESC1Q9GZL8 116 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 CHODLQ9H9P2 273 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 SLCO1B3Q9NPD5 702 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 B3GAT2Q9NPZ5 323 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 NOX1Q9Y5S8 564 aa15.14■□□□□ 0.01
COL7A1-208ENST00000470076 SLC35F4A4IF30 521 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 SEC14L2O76054 403 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 HPRP00739 348 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 BGLAPP02818 100 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 SRD5A1P18405 259 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 HNF1AP20823 631 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 GIFP27352 417 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 POU3F1Q03052 451 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-208ENST00000470076 DAG1Q14118 895 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 PHYHD1Q5SRE7 291 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 ZNF627Q7L945 461 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 SPATA21Q7Z572 469 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 RANBP3LQ86VV4 465 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-208ENST00000470076 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 ARMC8Q8IUR7 673 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 SVOPLQ8N434 492 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 HIPK4Q8NE63 616 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 TMEM43Q9BTV4 400 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 IKZF5Q9H5V7 419 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 NOX3Q9HBY0 568 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 B3GNT2Q9NY97 397 aa15.13■□□□□ 0.01
COL7A1-208ENST00000470076 MRPL39Q9NYK5 338 aaKnown RBP15.13■□□□□ 0.01
COL7A1-208ENST00000470076 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-208ENST00000470076 STAMBPO95630 424 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 HLA-DOBP13765 273 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 DAOP14920 347 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 AQP1P29972 269 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 ATP4BP51164 291 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 AQP5P55064 265 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 PUDPQ08623 228 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 PMS2P3Q13401 168 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 SNTB2Q13425 540 aaKnown RBP15.12■□□□□ 0.01
COL7A1-208ENST00000470076 ADRM1Q16186 407 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 GSG1Q2KHT4 349 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 AGKQ53H12 422 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 FAM120AOSQ5T036 256 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 CARD17Q5XLA6 110 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 EMC6Q9BV81 110 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 DYNLRB1Q9NP97 96 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 ANGPT4Q9Y264 503 aa15.12■□□□□ 0.01
COL7A1-208ENST00000470076 TMEM129A0AVI4 362 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 ZNF726A6NNF4 738 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 TPST2O60704 377 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 FMO6PO60774 539 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 MFN2O95140 757 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 MT-ATP6P00846 226 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 TGFAP01135 160 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 HLA-HP01893 362 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 NR4A1P22736 598 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 CDH12P55289 794 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 SQLEQ14534 574 aa15.11■□□□□ 0.01
COL7A1-208ENST00000470076 NHLRC1Q6VVB1 395 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms