RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SKP2Q13309 424 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SNTA1Q13424 505 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF169Q14929 603 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SEC23BQ15437 767 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 MICAQ29983 383 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 IQCCQ4KMZ1 466 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 RAET1LQ5VY80 246 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 AP1ARQ63HQ0 302 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TIGD3Q6B0B8 471 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF613Q6PF04 617 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ULK3Q6PHR2 472 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 INO80CQ6PI98 192 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PCSK4Q6UW60 755 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PEG10Q86TG7 708 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 HIPK1Q86Z02 1210 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 GRAMD2AQ8IUY3 354 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 APLFQ8IW19 511 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 NRMQ8IXM6 262 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 CDK20Q8IZL9 346 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SVOPLQ8N434 492 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 WDSUB1Q8N9V3 476 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 AQP11Q8NBQ7 271 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR2M7Q8NG81 312 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR2M3Q8NG83 312 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR10G2Q8NGC3 310 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR9Q2Q8NGE9 314 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR4C15Q8NGM1 316 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR14L1PQ8NHC6 308 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PFN4Q8NHR9 129 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PIGXQ8TBF5 258 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 GNPDA2Q8TDQ7 276 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM255BQ8WV15 326 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM171Q8WVE6 324 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM239Q8WW34 195 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM234Q8WY98 164 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SMPDL3BQ92485 455 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 NR4A3Q92570 626 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 HAS2Q92819 552 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 RFKQ969G6 155 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 C3orf49Q96BT1 292 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF524Q96C55 264 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC25A36Q96CQ1 311 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM41AQ96HV5 264 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SECISBP2Q96T21 854 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 FEVQ99581 238 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 EPYCQ99645 322 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 NPAS1Q99742 590 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 FAM173AQ9BQD7 235 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 C9orf16Q9BUW7 83 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 VCX3BQ9H321 246 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 RIBC2Q9H4K1 309 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 EXO5Q9H790 373 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM185BQ9H7F4 350 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 EVA1AQ9H8M9 152 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF556Q9HAH1 456 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SH2D2AQ9NP31 389 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 EXOSC3Q9NQT5 275 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 DEPPQ9NTK1 212 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TBC1D23Q9NUY8 699 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 MED17Q9NVC6 651 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 LUZP4Q9P127 313 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ICAM5Q9UMF0 924 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMED7Q9Y3B3 224 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 MED31Q9Y3C7 131 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 LYVE1Q9Y5Y7 322 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SPTBN2O15020 2390 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 AHCTF1Q8WYP5 2266 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SPEGQ15772 3267 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TRAV17A0A0B4J275 112 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A0B4J2E0 115 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A1B0GX12 115 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 A1L4Q6 167 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SH3PXD2BA1X283 911 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ENO4A6NNW6 628 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 EFCAB9A8MZ26 197 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 B4DXG7 233 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 LRRN3E7EW58 273 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 H3BN98 237 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FAAHO00519 579 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ADAM10O14672 748 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 EI24O14681 340 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNHIT1O43257 154 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 CHP2O43745 196 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 NME2P1O60361 137 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ZIC3O60481 467 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FMO6PO60774 539 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 TRIM3O75382 744 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 CEACAM4O75871 244 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 LYPD3O95274 346 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SLPIP03973 132 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 HIST1H2ABP04908 130 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 IGFBP1P08833 259 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 IL6RP08887 468 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 SAGP10523 405 aaPredicted RBP3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 PNMTP11086 282 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 ANXA8P13928 327 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 FUT1P19526 365 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 IL11P20809 199 aa3.66□□□□□ -1.82
TMEM39A-204ENST00000468545 PCSK6P29122 969 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms