RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 ROR2Q01974 943 aaKnown RBP9.04□□□□□ -0.96
SSR3-205ENST00000467789 DMTNQ08495 405 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 PUDPQ08623 228 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 SPOCK1Q08629 439 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 MAPRE2Q15555 327 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 DUSP7Q16829 419 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 TRMT5Q32P41 509 aaKnown RBP9.04□□□□□ -0.96
SSR3-205ENST00000467789 HIKESHIQ53FT3 197 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 LINC00114Q6XXX2 140 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 PXKQ7Z7A4 578 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 COMTD1Q86VU5 262 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 UEVLDQ8IX04 471 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 IL17RDQ8NFM7 739 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 SLC26A7Q8TE54 656 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 MPP4Q96JB8 637 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 MCHR1Q99705 422 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 ARHGDIGQ99819 225 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 SLC19A3Q9BZV2 496 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 B3GAT2Q9NPZ5 323 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 MRPL39Q9NYK5 338 aaKnown RBP9.04□□□□□ -0.96
SSR3-205ENST00000467789 ATP23Q9Y6H3 246 aa9.04□□□□□ -0.96
SSR3-205ENST00000467789 IGHV1-18A0A0C4DH31 117 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 VSTM5A8MXK1 200 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 ZNF99A8MXY4 864 aaPredicted RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 ATP6V1G2-DDX39BF2Z307 99 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 MS4A18H0YCH9 400 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 TLX2O43763 284 aaPredicted RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 SSX4O60224 188 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 TPST2O60704 377 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 ENTPD5O75356 428 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 IGKV3-15P01624 115 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 IGLV1-44P01699 117 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 BGLAPP02818 100 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 ARR3P36575 388 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 CDH12P55289 794 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 IL1RL1Q01638 556 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 PMS2P3Q13401 168 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 VMACQ2NL98 169 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 MS4A18Q3C1V0 323 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 CLEC2AQ6UVW9 174 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 B3GLCTQ6Y288 498 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 CCDC80Q76M96 950 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 LINGO2Q7L985 606 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 TMEM123Q8N131 208 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 KDM8Q8N371 416 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 SMYD1Q8NB12 490 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 OR4F15Q8NGB8 312 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 OR8J3Q8NGG0 315 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 OR5J2Q8NH18 312 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 THOC1Q96FV9 657 aaKnown RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 TMEM120AQ9BXJ8 343 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 POLR2J2Q9GZM3 115 aaKnown RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 PCDHAC1Q9H158 963 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 POLR2J3Q9H1A7 115 aaKnown RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 DENND2DQ9H6A0 471 aaPredicted RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 CRLF2Q9HC73 371 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 GPR35Q9HC97 309 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 SEC14L4Q9UDX3 406 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 GDF2Q9UK05 429 aaPredicted RBP9.03□□□□□ -0.96
SSR3-205ENST00000467789 MOKQ9UQ07 419 aa9.03□□□□□ -0.96
SSR3-205ENST00000467789 CR1P17927 2039 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 TRAPPC13A5PLN9 417 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 SLC22A2O15244 555 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 NDUFS7O75251 213 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 SASH3O75995 380 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 IFNA14P01570 189 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 CBR1P16152 277 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 SLC25A16P16260 332 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 CD247P20963 164 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 MAP2K3P46734 347 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 EFNA4P52798 201 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 ARFIP2P53365 341 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 ARF1P84077 181 aaKnown RBP9.02□□□□□ -0.97
SSR3-205ENST00000467789 NAAAQ02083 359 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 SELPLGQ14242 412 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 CEACAM16Q2WEN9 425 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 MMEL1Q495T6 779 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 ENTPD8Q5MY95 495 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 NANOGP8Q6NSW7 305 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 ERICH5Q6P6B1 374 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 TTC33Q6PID6 262 aaPredicted RBP9.02□□□□□ -0.97
SSR3-205ENST00000467789 ZNF627Q7L945 461 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 C20orf196Q8IYI0 205 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 C10orf53Q8N6V4 93 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 PCYOX1LQ8NBM8 494 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 NUP37Q8NFH4 326 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 GPR32P1Q8NGA4 272 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 OR10H5Q8NGA6 315 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 OR6T1Q8NGN1 323 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 OR10A6Q8NH74 314 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 ADAMTS16Q8TE57 1224 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 LRRC58Q96CX6 371 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 ECSITQ9BQ95 431 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 NELFAQ9H3P2 528 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 NANOGQ9H9S0 305 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 MYOZ1Q9NP98 299 aaPredicted RBP9.02□□□□□ -0.97
SSR3-205ENST00000467789 CA10Q9NS85 328 aa9.02□□□□□ -0.97
SSR3-205ENST00000467789 FBXL3Q9UKT7 428 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms