RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ZNF607Q96SK3 696 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 EPYCQ99645 322 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 CCDC28BQ9BUN5 200 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 ASPNQ9BXN1 380 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 TMEM38AQ9H6F2 299 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 CHODLQ9H9P2 273 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 TMEM27Q9HBJ8 222 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 SLC52A3Q9NQ40 469 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-206ENST00000466532 FBXO9Q9UK97 447 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-206ENST00000466532 SLC13A4Q9UKG4 626 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 KCNS2Q9ULS6 477 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 USP22Q9UPT9 525 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 CORO2BQ9UQ03 480 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 GMEB1Q9Y692 573 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 STAB1Q9NY15 2570 aa16.6■□□□□ 0.25
COL9A3-206ENST00000466532 A0A087WUJ7 227 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 IGHV2OR16-5A0A0B4J2B6 119 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 A0A0B4J2E0 115 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 LOC100289279A0A1B0GTE1 492 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 A0A1B0GX12 115 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 PRORSD1PA6NEY8 169 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 EVPLLA8MZ36 301 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 hCG_2039718K7EN88 272 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 HPRP00739 348 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 HLA-DOBP13765 273 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 GPX2P18283 190 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 SLC6A2P23975 617 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 IGFBP5P24593 272 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 AQP1P29972 269 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 AQP5P55064 265 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 POU3F1Q03052 451 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-206ENST00000466532 OR1Q1Q15612 314 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 AGKQ53H12 422 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 SPATA21Q7Z572 469 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 CCDC36Q8IYA8 594 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 SVOPLQ8N434 492 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 BHLHE22Q8NFJ8 381 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-206ENST00000466532 OR6S1Q8NH40 331 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 MSI2Q96DH6 328 aaKnown RBP16.59■□□□□ 0.25
COL9A3-206ENST00000466532 SLC41A3Q96GZ6 507 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 ANKRD27Q96NW4 1050 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 EMC6Q9BV81 110 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 BPESC1Q9GZL8 116 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 CORINQ9Y5Q5 1042 aa16.59■□□□□ 0.25
COL9A3-206ENST00000466532 SLC35F4A4IF30 521 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 SERPINB7O75635 380 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 BGLAPP02818 100 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 ERCC1P07992 297 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-206ENST00000466532 IL17RELQ6ZVW7 336 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 RANBP3LQ86VV4 465 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-206ENST00000466532 ARMC8Q8IUR7 673 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 C20orf196Q8IYI0 205 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 SCAIQ8N9R8 606 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF540Q8NDQ6 660 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 HIPK4Q8NE63 616 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 IL17RDQ8NFM7 739 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 DOK1Q99704 481 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 WFDC6Q9BQY6 131 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 MED29Q9NX70 200 aa16.58■□□□□ 0.24
COL9A3-206ENST00000466532 SVEP1Q4LDE5 3571 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 TPST2O60704 377 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 DAOP14920 347 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF23P17027 643 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 PMS2P3Q13401 168 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 SNTB2Q13425 540 aaKnown RBP16.57■□□□□ 0.24
COL9A3-206ENST00000466532 DAG1Q14118 895 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 SQLEQ14534 574 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 ADRM1Q16186 407 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 KRT80Q6KB66 452 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 ZCCHC24Q8N2G6 241 aaKnown RBP16.57■□□□□ 0.24
COL9A3-206ENST00000466532 C10orf53Q8N6V4 93 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 NEU4Q8WWR8 484 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-206ENST00000466532 TXNDC15Q96J42 360 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 MOGAT1Q96PD6 335 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 NOX3Q9HBY0 568 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 DYNLRB1Q9NP97 96 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 B3GAT2Q9NPZ5 323 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 ANGPT4Q9Y264 503 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 NOX1Q9Y5S8 564 aa16.57■□□□□ 0.24
COL9A3-206ENST00000466532 TMEM129A0AVI4 362 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 SH3PXD2BA1X283 911 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 LRRN3E7EW58 273 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 STAMBPO95630 424 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 HLA-HP01893 362 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 CD79AP11912 226 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 SRD5A1P18405 259 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 ATP4BP51164 291 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 CDH12P55289 794 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 PUDPQ08623 228 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 CAMK2DQ13557 499 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 GSG1Q2KHT4 349 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 FAM120AOSQ5T036 256 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 ZNF813Q6ZN06 617 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 CKAP2Q8WWK9 683 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 LRR1Q96L50 414 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 CPPED1Q9BRF8 314 aaPredicted RBP16.56■□□□□ 0.24
COL9A3-206ENST00000466532 TMEM43Q9BTV4 400 aa16.56■□□□□ 0.24
COL9A3-206ENST00000466532 EVA1AQ9H8M9 152 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms