RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 B4GALT1P15291 398 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 PRKAR1BP31321 381 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 POU3F1Q03052 451 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-203ENST00000466285 FADDQ13158 208 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 C1DQ13901 141 aaKnown RBP17.76■□□□□ 0.43
COL6A1-203ENST00000466285 ALG10BQ5I7T1 473 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 LRIF1Q5T3J3 769 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 GCNT6Q5T4J0 391 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 EPGNQ6UW88 154 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 LRP11Q86VZ4 500 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 C20orf196Q8IYI0 205 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 LSMEM1Q8N8F7 131 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 CKAP2Q8WWK9 683 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 SLC38A4Q969I6 547 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 SLC41A3Q96GZ6 507 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 MYOZ1Q9NP98 299 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-203ENST00000466285 RPS6KB2Q9UBS0 482 aa17.76■□□□□ 0.43
COL6A1-203ENST00000466285 A0A087WUJ7 227 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 SLCO1B7G3V0H7 640 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 SERPINI2O75830 405 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 APEX1P27695 318 aaKnown RBP17.75■□□□□ 0.43
COL6A1-203ENST00000466285 PIGFQ07326 219 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 RIN1Q13671 783 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 DAG1Q14118 895 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 MAD2L1BPQ15013 274 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-203ENST00000466285 DHRS4L2Q6PKH6 230 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 H1FNTQ75WM6 255 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-203ENST00000466285 TSPYL5Q86VY4 417 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-203ENST00000466285 PIK3C3Q8NEB9 887 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 FGFBP3Q8TAT2 258 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 SLC35B4Q969S0 331 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 RAB1BQ9H0U4 201 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 C12orf10Q9HB07 376 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 DYNLRB1Q9NP97 96 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 SLCO1B3Q9NPD5 702 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 FZR1Q9UM11 496 aa17.75■□□□□ 0.43
COL6A1-203ENST00000466285 A0A0B4J2E0 115 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 A0A1B0GX12 115 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 TMEM247A6NEH6 219 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 C5orf58C9J3I9 102 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 WNT9BO14905 357 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 PATE4P0C8F1 98 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 ETS2P15036 469 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 ZNF14P17017 642 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-203ENST00000466285 TCN1P20061 433 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-203ENST00000466285 THBS2P35442 1172 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 ARR3P36575 388 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 CDK6Q00534 326 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 CAMK2DQ13557 499 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 MFSD13AQ14CX5 517 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 WDR88Q6ZMY6 472 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 UEVLDQ8IX04 471 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 ADPRHL1Q8NDY3 354 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 ANKK1Q8NFD2 765 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 SYT3Q9BQG1 590 aa17.74■□□□□ 0.43
COL6A1-203ENST00000466285 CACYBPQ9HB71 228 aaKnown RBP17.74■□□□□ 0.43
COL6A1-203ENST00000466285 THUMPD1Q9NXG2 353 aaKnown RBP17.74■□□□□ 0.43
COL6A1-203ENST00000466285 M0R3H8 397 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 NCR1O76036 304 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 THY1P04216 161 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 CD79AP11912 226 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 HOXB1P14653 301 aaPredicted RBP17.73■□□□□ 0.43
COL6A1-203ENST00000466285 NQO1P15559 274 aaKnown RBP17.73■□□□□ 0.43
COL6A1-203ENST00000466285 NR4A1P22736 598 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 ALDH3B1P43353 468 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 SEC24CP53992 1094 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 OR1Q1Q15612 314 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 NPTX1Q15818 432 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 ELFN2Q5R3F8 820 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 BLOC1S3Q6QNY0 202 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 ZNF584Q8IVC4 421 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 ZNF786Q8N393 782 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 RNF217Q8TC41 542 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 ARMC7Q9H6L4 198 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 NARFLQ9H6Q4 476 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 TMBIM4Q9HC24 238 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 CCDC167Q9P0B6 97 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 USP22Q9UPT9 525 aa17.73■□□□□ 0.43
COL6A1-203ENST00000466285 LOC102725191A0A1B0GVB3 256 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 LYPD3O95274 346 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 HPXP02790 462 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 OPN1SWP03999 348 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 ZNF35P13682 527 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 ITGA2P17301 1181 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 MRPL19P49406 292 aaKnown RBP17.72■□□□□ 0.43
COL6A1-203ENST00000466285 IDH3AP50213 366 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 SLC18A1P54219 525 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 CDH12P55289 794 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 CDH15P55291 814 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 RGS8P57771 180 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-203ENST00000466285 SCARB2Q14108 478 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 SELPLGQ14242 412 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 ZNF813Q6ZN06 617 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 RINLQ6ZS11 566 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 OR4D11Q8NGI4 311 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 UBASH3BQ8TF42 649 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 MRPL24Q96A35 216 aaKnown RBP17.72■□□□□ 0.43
COL6A1-203ENST00000466285 SPDL1Q96EA4 605 aa17.72■□□□□ 0.43
COL6A1-203ENST00000466285 CPPED1Q9BRF8 314 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms