RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF620Q6ZNG0 422 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 RTL4Q6ZR62 310 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 OR5M1Q8NGP8 315 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 DNAJA4Q8WW22 397 aaPredicted RBP16.82■□□□□ 0.28
CAPN3-209ENST00000466222 TMEM203Q969S6 136 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 SGCZQ96LD1 299 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 DPH1Q9BZG8 443 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 ZNF552Q9H707 407 aaPredicted RBP16.82■□□□□ 0.28
CAPN3-209ENST00000466222 TMEM165Q9HC07 324 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 TIGARQ9NQ88 270 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 IL20RAQ9UHF4 553 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 GPR52Q9Y2T5 361 aa16.82■□□□□ 0.28
CAPN3-209ENST00000466222 NINQ8N4C6 2090 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 FAM172BPA6NC97 362 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 ZNF891A8MT65 544 aaPredicted RBP16.81■□□□□ 0.28
CAPN3-209ENST00000466222 HLA-DQB1P01920 261 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 CSF3P09919 207 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 AZGP1P25311 298 aaKnown RBP16.81■□□□□ 0.28
CAPN3-209ENST00000466222 ATAD3CQ5T2N8 411 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 GID4Q8IVV7 300 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 RDH10Q8IZV5 341 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 FDCSPQ8NFU4 85 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 OR2T33Q8NG76 320 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 OR2M3Q8NG83 312 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 OR4Q3Q8NH05 313 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 NTNG2Q96CW9 530 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 FRMD6Q96NE9 622 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 SECISBP2Q96T21 854 aaKnown RBP16.81■□□□□ 0.28
CAPN3-209ENST00000466222 TAS2R10Q9NYW0 307 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 H2AFY2Q9P0M6 372 aaPredicted RBP16.81■□□□□ 0.28
CAPN3-209ENST00000466222 ADAM30Q9UKF2 790 aa16.81■□□□□ 0.28
CAPN3-209ENST00000466222 CCDC182A6NF36 153 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ANKUB1A6NFN9 424 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 IDH3BO43837 385 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 IFI30P13284 250 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 EIF2S3P41091 472 aaKnown RBP16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ID4P47928 161 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 RRADP55042 308 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 FABP5Q01469 135 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 EGR4Q05215 589 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 CRYZQ08257 329 aaKnown RBP16.8■□□□□ 0.28
CAPN3-209ENST00000466222 SNTA1Q13424 505 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 SLC35F1Q5T1Q4 408 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 C1QL3Q5VWW1 255 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 MZT2AQ6P582 158 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 NEDD4LQ96PU5 975 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 FN3KQ9H479 309 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 CSAG2Q9Y5P2 127 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ATMQ13315 3056 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ZC3H12DA2A288 527 aaKnown RBP16.8■□□□□ 0.28
CAPN3-209ENST00000466222 MEIOCA2RUB1 952 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 PINLYPA6NC86 204 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ELOA3DA6NLF2 546 aaPredicted RBP16.8■□□□□ 0.28
CAPN3-209ENST00000466222 GP1BBP13224 206 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 PRKCAP17252 672 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 IL11P20809 199 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 RIN1Q13671 783 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 OR1C1Q15619 314 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ELOA3BQ3SY89 546 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 PYDC2Q56P42 97 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 LCN1P1Q5VSP4 162 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 SLC30A6Q6NXT4 461 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 LRRC17Q8N6Y2 441 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ARIH2OSQ8N7S6 290 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 ELOA3Q8NG57 546 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 CAPSLQ8WWF8 208 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 BPIFA2Q96DR5 249 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 UTP23Q9BRU9 249 aaKnown RBP16.8■□□□□ 0.28
CAPN3-209ENST00000466222 KLHL1Q9NR64 748 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 SDHAF3Q9NRP4 125 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 MED31Q9Y3C7 131 aa16.8■□□□□ 0.28
CAPN3-209ENST00000466222 IGLV3-32A0A0A0MS00 114 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 CASKO14936 926 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 P04436 131 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 NR4A2P43354 598 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 TGM4P49221 684 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 SOX8P57073 446 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 CLEC12AQ5QGZ9 265 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 TMEM81Q6P7N7 255 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 ADGRG3Q86Y34 549 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 PLCZ1Q86YW0 608 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 DND1Q8IYX4 353 aaKnown RBP16.79■□□□□ 0.28
CAPN3-209ENST00000466222 RNF113BQ8IZP6 322 aaKnown RBP16.79■□□□□ 0.28
CAPN3-209ENST00000466222 FADS6Q8N9I5 356 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 DCBLD2Q96PD2 775 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 SOSTQ9BQB4 213 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 KCNMB2Q9Y691 235 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 NCOR2Q9Y618 2525 aa16.79■□□□□ 0.28
CAPN3-209ENST00000466222 RFPL3SP0C7P2 107 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 RFC3P40938 356 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 IFITM2Q01629 132 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 FOXF1Q12946 379 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 ZFP69Q49AA0 526 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 RPL13AP3Q6NVV1 102 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 SPACA3Q8IXA5 215 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 OR4K17Q8NGC6 315 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 SNIP1Q8TAD8 396 aaKnown RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 KTI12Q96EK9 354 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 ZC3HAV1LQ96H79 300 aaKnown RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 TM9SF2Q99805 663 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms