RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SMPD3Q9NY59 655 aaPredicted RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 KLHL9Q9P2J3 617 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 RALYQ9UKM9 306 aaKnown RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 ADAM18Q9Y3Q7 739 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 CACNA1CQ13936 2221 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 H0YJX3 145 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ARPC3O15145 178 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ZNF432O94892 652 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 OR6A2O95222 327 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 PPP1R3DO95685 299 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TXNDC12O95881 172 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 IFNGR1P15260 489 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 AHCYP23526 432 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 AGTR1P30556 359 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 SLC6A6P31641 620 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TIMP3P35625 211 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 VHLP40337 213 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 UQCRFS1P47985 274 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 AQP4P55087 323 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 CTXN1P60606 82 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ERVK-25P63136 954 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 SNCBQ16143 134 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 IGFBP7Q16270 282 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ACKR1Q16570 336 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 PGGHGQ32M88 737 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 CLEC12AQ5QGZ9 265 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ARMC4Q5T2S8 1044 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TMEM225Q6GV28 225 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ACSM5Q6NUN0 579 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 SLC35D2Q76EJ3 337 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 P4HA3Q7Z4N8 544 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 GPAT4Q86UL3 456 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 UEVLDQ8IX04 471 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 IQCF1Q8N6M8 205 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 NAXEQ8NCW5 288 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 OR52L1Q8NGH7 329 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TEX47Q8TBZ9 253 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ASB10Q8WXI3 467 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TMEM45BQ96B21 275 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 GMPPAQ96IJ6 420 aaPredicted RBP9.9□□□□□ -0.82
VCP-204ENST00000466100 TXNDC15Q96J42 360 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ZNF385AQ96PM9 386 aaKnown RBP9.9□□□□□ -0.82
VCP-204ENST00000466100 PITX2Q99697 317 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TM9SF2Q99805 663 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TSSK6Q9BXA6 273 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 PRRG4Q9BZD6 226 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TXNIPQ9H3M7 391 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 RIBC2Q9H4K1 309 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 TBC1D23Q9NUY8 699 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 MED29Q9NX70 200 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 ENOPH1Q9UHY7 261 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 OSGIN2Q9Y236 505 aa9.9□□□□□ -0.82
VCP-204ENST00000466100 UTP20O75691 2785 aaKnown RBP9.9□□□□□ -0.83
VCP-204ENST00000466100 GCN1Q92616 2671 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 E9PLN8 166 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 H3BN98 237 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 IMPA2O14732 288 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 SLC16A6O15403 523 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 TNFSF13O75888 250 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 PLGP00747 810 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 YES1P07947 543 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 ZNF43P17038 809 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 CDH2P19022 906 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 EDNRAP25101 427 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 POU1F1P28069 291 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 GRK5P34947 590 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 RPL4P36578 427 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 KIR2DL2P43627 348 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 GIPRP48546 466 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 RPL27P61353 136 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 IL1RL1Q01638 556 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 MELKQ14680 651 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 GINS1Q14691 196 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 PTGES3Q15185 160 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 TAF11Q15544 211 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 ZIK1Q3SY52 487 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 MESTQ5EB52 335 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 ZNF362Q5T0B9 420 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 RIPPLY2Q5TAB7 128 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 EEF1A1P5Q5VTE0 462 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 SLX4IPQ5VYV7 408 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 TMEM236Q5W0B7 351 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 C12orf73Q69YU5 71 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 GPR139Q6DWJ6 353 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 OR2A2Q6IF42 318 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 SLC27A4Q6P1M0 643 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 NCCRP1Q6ZVX7 275 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 CCDC71Q8IV32 467 aaPredicted RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 TUSC5Q8IXB3 177 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 TMEM123Q8N131 208 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 OR2T33Q8NG76 320 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 Q96M85 177 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 ZFP3Q96NJ6 502 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 VKORC1Q9BQB6 163 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 TACO1Q9BSH4 297 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 IFT27Q9BW83 186 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 POLDIP3Q9BY77 421 aaKnown RBP9.89□□□□□ -0.83
VCP-204ENST00000466100 NDEL1Q9GZM8 345 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 VCX3BQ9H321 246 aa9.89□□□□□ -0.83
VCP-204ENST00000466100 GLRX2Q9NS18 164 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms