RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 OR14I1A6ND48 311 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 SPINT1O43278 529 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 DLSTP36957 453 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 MECP2P51608 486 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 UNQ9370/PRO34162Q6UXP9 181 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 BIVMQ86UB2 503 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 TMEFF1Q8IYR6 380 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 OR6N1Q8NGY5 312 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 C3orf49Q96BT1 292 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 MRGPRX3Q96LB0 322 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 ZNF681Q96N22 645 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 MENTQ9BUN1 341 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 PIGMQ9H3S5 423 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 EPHX3Q9H6B9 360 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 ADAM29Q9UKF5 820 aa12.74□□□□□ -0.37
TGFBR3-204ENST00000465892 MEX3AA1L020 520 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 CLEC3AO75596 197 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 IFNGP01579 166 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 CAPZA1P52907 286 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 S100A12P80511 92 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 RIPPLY1Q0D2K3 151 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 ZNF234Q14588 700 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 PRAMEF8Q5VWM4 474 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 PRAMEF7Q5VXH5 474 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 TMPRSS11FQ6ZWK6 438 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 FAM219AQ8IW50 185 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 OR2A1Q8NGT9 310 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 PPP1R1CQ8WVI7 109 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 FGF13Q92913 245 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 RASD2Q96D21 266 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 BCL2L14Q9BZR8 327 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 ZNF629Q9UEG4 869 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 NOP16Q9Y3C1 178 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 DOCK9Q9BZ29 2069 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 TSPAN11A1L157 253 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 OR52A4PA6NMU1 304 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 NTHL1P78549 312 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 PRDX1Q06830 199 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.73□□□□□ -0.375e-11■■■■■ 42.7
TGFBR3-204ENST00000465892 ETV3LQ6ZN32 361 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 RHOUQ7L0Q8 258 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 ZAR1Q86SH2 424 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 LMF1Q96S06 567 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 SLITRK2Q9H156 845 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 SPHK1Q9NYA1 384 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 HAO2Q9NYQ3 351 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 HCFC2Q9Y5Z7 792 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 WNT6Q9Y6F9 365 aa12.73□□□□□ -0.37
TGFBR3-204ENST00000465892 TMEM72A0PK05 275 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 SNAPC5O75971 98 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 LYPD3O95274 346 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CCR2P41597 374 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 AVPI1Q5T686 147 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CCDC36Q8IYA8 594 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CAMKVQ8NCB2 501 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 IRF7Q92985 503 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 APOBEC3BQ9UH17 382 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CDV3Q9UKY7 258 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 A0A0D9SG52 128 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 PQLC2LA1A4F0 135 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 RNF222A6NCQ9 220 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 DUXAA6NLW8 204 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 PCCBP05166 539 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 AQP2P41181 271 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 TRA2BP62995 288 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 NR0B2Q15466 257 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 GLT8D1Q68CQ7 371 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 OR10R2Q8NGX6 335 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CMTM3Q96MX0 182 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 GPN3Q9UHW5 284 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CACNA1IQ9P0X4 2223 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 C17orf113A0A1B0GUU1 675 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 GGT3PA6NGU5 568 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 ZNF860A6NHJ4 632 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 BCL2L11O43521 198 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 XRCC3O43542 346 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 ICOSLGO75144 302 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 ALOX12BO75342 701 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 SLC6A6P31641 620 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 SLC7A9P82251 487 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 MRPS10P82664 201 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 POU4F2Q12837 409 aa12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 RNF113BQ8IZP6 322 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-204ENST00000465892 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms