RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 NMNAT2Q9BZQ4 307 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 FN3KQ9H479 309 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 IMPAD1Q9NX62 359 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 TVP23BQ9NYZ1 205 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 B3GAT1Q9P2W7 334 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.14
UBA3-208ENST00000465627 TRAPPC4Q9Y296 219 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 KLF13Q9Y2Y9 288 aaPredicted RBP7.9□□□□□ -1.14
UBA3-208ENST00000465627 HDGFL3Q9Y3E1 203 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 ADAM18Q9Y3Q7 739 aa7.9□□□□□ -1.14
UBA3-208ENST00000465627 PCDHGA9Q9Y5G4 932 aaKnown RBP7.9□□□□□ -1.14
UBA3-208ENST00000465627 LOC102725191A0A1B0GVB3 256 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 A0A1W2PNV4 684 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 A6NHS1 94 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 CLCA1A8K7I4 914 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 ZNF814B7Z6K7 855 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 J3QRE1 110 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 M0R082 166 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 TLX2O43763 284 aaPredicted RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 MRPS14O60783 128 aaKnown RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 PMS2P2O95744 297 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 PIPP12273 146 aaPredicted RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 HIST1H1CP16403 213 aaKnown RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 BMP7P18075 431 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 RAC1P63000 192 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 MVKQ03426 396 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 IRF3Q14653 427 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 MFSD13AQ14CX5 517 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 SNAPC1Q16533 368 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 MEDAGQ5VYS4 303 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 GTF2IRD2BQ6EKJ0 949 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 XAF1Q6GPH4 301 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 TMEM154Q6P9G4 183 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 CASP12Q6UXS9 341 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 GALNTL5Q7Z4T8 443 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 YRDCQ86U90 279 aaKnown RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 GTF2IRD2Q86UP8 949 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 WDFY1Q8IWB7 410 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 SPARTQ8N0X7 666 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 TMEM251Q8N6I4 163 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 NPEPL1Q8NDH3 523 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 BPIFB6Q8NFQ5 453 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 OR52L1Q8NGH7 329 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 ZNF417Q8TAU3 575 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 ZNF519Q8TB69 540 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 KISS1RQ969F8 398 aaPredicted RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 LRR1Q96L50 414 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 C5orf34Q96MH7 638 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 ZNF587Q96SQ5 575 aaPredicted RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 KATNB1Q9BVA0 655 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 TAPBPLQ9BX59 468 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 HCAR1Q9BXC0 346 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 MRPS26Q9BYN8 205 aaKnown RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 ADNPQ9H2P0 1102 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 ZDHHC11Q9H8X9 412 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 QPCTLQ9NXS2 382 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 ALKBH4Q9NXW9 302 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 CNOT2Q9NZN8 540 aaKnown RBP7.89□□□□□ -1.15
UBA3-208ENST00000465627 DNAJC27Q9NZQ0 273 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 GPR52Q9Y2T5 361 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 SLC6A5Q9Y345 797 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 CORINQ9Y5Q5 1042 aa7.89□□□□□ -1.15
UBA3-208ENST00000465627 A0A087WXM4 84 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 A0A0J9YW62 118 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 A0A1W2PNR3 127 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 CCDC182A6NF36 153 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 H3BML4 177 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 PRODHO43272 600 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 SMNDC1O75940 238 aaKnown RBP eCLIP7.88□□□□□ -1.15
UBA3-208ENST00000465627 CLDN1O95832 211 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 PDGFAP04085 211 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 CDK1P06493 297 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 CELA3AP09093 270 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 DBTP11182 482 aaKnown RBP7.88□□□□□ -1.15
UBA3-208ENST00000465627 JUNBP17275 347 aaPredicted RBP7.88□□□□□ -1.15
UBA3-208ENST00000465627 KLK2P20151 261 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 NOS3P29474 1203 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 SDHAP31040 664 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 MEOX1P50221 254 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 NUDT6P53370 316 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 MLLT10P55197 1068 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 TPD52P55327 224 aaPredicted RBP7.88□□□□□ -1.15
UBA3-208ENST00000465627 ERVK-25P63136 954 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 ZNF91Q05481 1191 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 PIGFQ07326 219 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 ITGADQ13349 1161 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 DOC2BQ14184 412 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 CRMP1Q14194 572 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 ALG10Q5BKT4 473 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 MESTQ5EB52 335 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 ZNF766Q5HY98 468 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 EMC4Q5J8M3 183 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 ARMC4Q5T2S8 1044 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 RNLSQ5VYX0 342 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 NXNL2Q5VZ03 156 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 NIPAL3Q6P499 406 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 ARHGAP11AQ6P4F7 1023 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 B3GNT6Q6ZMB0 384 aa7.88□□□□□ -1.15
UBA3-208ENST00000465627 TMPPEQ6ZT21 453 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms