RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ITCHQ96J02 903 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 RBM14Q96PK6 669 aaKnown RBP2.37□□□□□ -2.03
SMC4-205ENST00000465563 ZBTB18Q99592 522 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 COPS8Q99627 209 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 P2RY13Q9BPV8 354 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 RASL11BQ9BPW5 248 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 NRIP2Q9BQI9 281 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 RBKSQ9H477 322 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 NIPAL2Q9H841 368 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 TREM2Q9NZC2 230 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 CLCF1Q9UBD9 225 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 MTRF1LQ9UGC7 380 aaKnown RBP2.37□□□□□ -2.03
SMC4-205ENST00000465563 PIGLQ9Y2B2 252 aa2.37□□□□□ -2.03
SMC4-205ENST00000465563 OR52A4PA6NMU1 304 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 POLR2DO15514 142 aaKnown RBP2.36□□□□□ -2.03
SMC4-205ENST00000465563 MED7O43513 233 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 PLEKP08567 350 aaPredicted RBP2.36□□□□□ -2.03
SMC4-205ENST00000465563 CHTF8P0CG12 524 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 ANXA13P27216 316 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 SH3BGRP55822 239 aaPredicted RBP2.36□□□□□ -2.03
SMC4-205ENST00000465563 ZNF77Q15935 545 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 DGUOKQ16854 277 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 C1orf94Q6P1W5 598 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 ENPP6Q6UWR7 440 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 COX15Q7KZN9 410 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 OR6X1Q8NH79 312 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 MAIP1Q8WWC4 291 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 SHC3Q92529 594 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 FGF14Q92915 247 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 CEP170P1Q96L14 293 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 C12orf42Q96LP6 360 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 RPRD1AQ96P16 312 aaPredicted RBP2.36□□□□□ -2.03
SMC4-205ENST00000465563 TSG101Q99816 390 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 TRIM62Q9BVG3 475 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 DEFB127Q9H1M4 99 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 ANKRD19PQ9H560 264 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 SGK2Q9HBY8 427 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 POLE4Q9NR33 117 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 HYPKQ9NX55 129 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 THUMPD1Q9NXG2 353 aaKnown RBP2.36□□□□□ -2.03
SMC4-205ENST00000465563 HOXC10Q9NYD6 342 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 ASF1AQ9Y294 204 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 WIF1Q9Y5W5 379 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
SMC4-205ENST00000465563 C6orf47O95873 294 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 CCDC130P13994 396 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 ATP6V1B2P21281 511 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 IL12AP29459 219 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 HOXA9P31269 272 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 SELENOTP62341 195 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 RPL23AP62750 156 aaKnown RBP2.35□□□□□ -2.03
SMC4-205ENST00000465563 OR5I1Q13606 314 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 GK3PQ14409 553 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 DEFB116Q30KQ4 102 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 CHRFAM7AQ494W8 412 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 C6orf226Q5I0X4 101 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 TIGD3Q6B0B8 471 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 OR2A2Q6IF42 318 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 TMIGD1Q6UXZ0 262 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 H2BFWTQ7Z2G1 175 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 HMGN2P46Q86SG4 172 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 SLC26A11Q86WA9 606 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 RALGPS2Q86X27 583 aaPredicted RBP2.35□□□□□ -2.03
SMC4-205ENST00000465563 PNKDQ8N490 385 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 OR1L4Q8NGR5 311 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 OR13C2Q8NGS9 318 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 ZNF641Q96N77 438 aaPredicted RBP2.35□□□□□ -2.03
SMC4-205ENST00000465563 CLCC1Q96S66 551 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 TMEM246Q9BRR3 403 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 OR11A1Q9GZK7 315 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 RNF167Q9H6Y7 350 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 SLC25A22Q9H936 323 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 LY9Q9HBG7 655 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 LHX9Q9NQ69 397 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 COX16Q9P0S2 106 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 SEC14L3Q9UDX4 400 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 CRCT1Q9UGL9 99 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 MAP3K15Q6ZN16 1313 aa2.35□□□□□ -2.03
SMC4-205ENST00000465563 NSG1A0A0A6YYJ2 146 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 IQANK1A0A1B0GTG1 560 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 A0A1B0GVL5 298 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 FAM240BA0A1B0GVZ2 78 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 OR5B21A6NL26 309 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 A8MXQ7 604 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 C11orf94C9JXX5 98 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 AGPAT2O15120 278 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 OXSR1O95747 527 aaPredicted RBP2.34□□□□□ -2.03
SMC4-205ENST00000465563 MOSP00540 346 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 ETS2P15036 469 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 VHLP40337 213 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 GSSP48637 474 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 TAS2R19P59542 299 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 OGDHQ02218 1023 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 PPIL2Q13356 520 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 ATP6AP1Q15904 470 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 FAM83EQ2M2I3 478 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 CTSL3PQ5NE16 218 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 SAMD4BQ5PRF9 694 aaKnown RBP2.34□□□□□ -2.03
SMC4-205ENST00000465563 PHYHD1Q5SRE7 291 aa2.34□□□□□ -2.03
SMC4-205ENST00000465563 HSDL2Q6YN16 418 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms