RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 RAB40ALP0C0E4 278 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 CDKN2AP42771 156 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 MC2RQ01718 297 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 CLVS2Q5SYC1 327 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 PDSS1Q5T2R2 415 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 SLC6A19Q695T7 634 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 POMGNT2Q8NAT1 580 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 RAB40AQ8WXH6 277 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 ASB12Q8WXK4 309 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 HHIPL1Q96JK4 782 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 PELOQ9BRX2 385 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 EXO5Q9H790 373 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 TMEM185BQ9H7F4 350 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 SRA1Q9HD15 236 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 MYEF2Q9P2K5 600 aaKnown RBP11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 DEC1Q9P2X7 70 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 DAPP1Q9UN19 280 aa11.49□□□□□ -0.57
CLCNKA-204ENST00000464764 H7C417 338 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 DCTN6O00399 190 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 GPRIN2O60269 458 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 BRINP1O60477 761 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 IGKV1D-16P01601 117 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 CEACAM5P06731 702 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 RAB3AP20336 220 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 MECP2P51608 486 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 PGDP52209 483 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 CTAG1AP78358 180 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 HTRA4P83105 476 aaPredicted RBP11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF546Q86UE3 836 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 SUSD6Q92537 303 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 SEC22AQ96IW7 307 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 PTDSS2Q9BVG9 487 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 TEX101Q9BY14 249 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 MTFP1Q9UDX5 166 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 MRM2Q9UI43 246 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ENTPD2Q9Y5L3 495 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 EML5Q05BV3 1969 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 BLOC1S5-TXNDC5H3BN57 136 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 CCSO14618 274 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ANXA2P07355 339 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 LUMP51884 338 aaPredicted RBP11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 LEG1Q6P5S2 330 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 OR6K3Q8NGY3 331 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 LCN9Q8WX39 176 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 RELTQ969Z4 430 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 GAL3ST3Q96A11 431 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 DEFB118Q96PH6 123 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 POFUT1Q9H488 388 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 STARD5Q9NSY2 213 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 DPP7Q9UHL4 492 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF337Q9Y3M9 751 aa11.48□□□□□ -0.57
CLCNKA-204ENST00000464764 M0QYG6 137 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 GPR31O00270 319 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 ITGB8P26012 769 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 GMFBP60983 142 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 ILF3Q12906 894 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 LY6G6FQ5SQ64 297 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 LINC01590Q5TEZ4 76 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 USP53Q70EK8 1073 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 RD3Q7Z3Z2 195 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 EID2Q8N6I1 236 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 OR5AK2Q8NH90 309 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 PPP1R14AQ96A00 147 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 ADAD1Q96M93 576 aaKnown RBP11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 FOXN4Q96NZ1 517 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF768Q9H5H4 540 aaKnown RBP11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 DNAJB12Q9NXW2 375 aaKnown RBP11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 A0A1W2PP55 124 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 HRKO00198 91 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF254O75437 659 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 UPK3AO75631 287 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 LDOC1O95751 146 aaPredicted RBP11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 GGTLC2Q14390 218 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 GAB4Q2WGN9 574 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 Q499Y3 187 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 NKAIN2Q5VXU1 208 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 SPRED2Q7Z698 418 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 SLC35F3Q8IY50 421 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 TMEM185AQ8NFB2 350 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 WFIKKN2Q8TEU8 576 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 TMEM106AQ96A25 262 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF426Q9BUY5 554 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 BARX1Q9HBU1 254 aaPredicted RBP11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 HEATR5AQ86XA9 2040 aa11.47□□□□□ -0.57
CLCNKA-204ENST00000464764 XRCC3O43542 346 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 PRAMEF2O60811 474 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 CALCBP10092 127 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 CSF2RAP15509 400 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 ZNF684Q5T5D7 378 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 LIN54Q6MZP7 749 aa11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
CLCNKA-204ENST00000464764 CDRT4Q8N9R6 151 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms