RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 FAM169BQ8N8A8 192 aa12.55□□□□□ -0.4
ALMS1-202ENST00000464408 SMYD1Q8NB12 490 aa12.55□□□□□ -0.4
ALMS1-202ENST00000464408 ANKK1Q8NFD2 765 aa12.55□□□□□ -0.4
ALMS1-202ENST00000464408 NUP37Q8NFH4 326 aa12.55□□□□□ -0.4
ALMS1-202ENST00000464408 DNAJA4Q8WW22 397 aaPredicted RBP12.55□□□□□ -0.4
ALMS1-202ENST00000464408 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
ALMS1-202ENST00000464408 ZNF317Q96PQ6 595 aaPredicted RBP12.55□□□□□ -0.4
ALMS1-202ENST00000464408 CPPED1Q9BRF8 314 aaPredicted RBP12.55□□□□□ -0.4
ALMS1-202ENST00000464408 SHARPINQ9H0F6 387 aa12.55□□□□□ -0.4
ALMS1-202ENST00000464408 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.55□□□□□ -0.4
ALMS1-202ENST00000464408 LOC100289279A0A1B0GTE1 492 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 LOC390937A0A1W2PQ73 354 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 SH3PXD2BA1X283 911 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 LRP5LA4QPB2 252 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 ZNF99A8MXY4 864 aaPredicted RBP12.54□□□□□ -0.4
ALMS1-202ENST00000464408 M0R3H8 397 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 NDUFS8O00217 210 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 OR2T1O43869 369 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 SERPINI2O75830 405 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 TGDSO95455 350 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 OPN1SWP03999 348 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
ALMS1-202ENST00000464408 NQO1P15559 274 aaKnown RBP12.54□□□□□ -0.4
ALMS1-202ENST00000464408 GPX2P18283 190 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 IL2RGP31785 369 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 GZMKP49863 264 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 PPOXP50336 477 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 CDH12P55289 794 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 KRTAP24-1Q3LI83 254 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 FAM91A1Q658Y4 838 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 KRT80Q6KB66 452 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 DLEU7Q6UYE1 221 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 SPATA21Q7Z572 469 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 PTOV1Q86YD1 416 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 UEVLDQ8IX04 471 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 ADPRHL1Q8NDY3 354 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 PIK3C3Q8NEB9 887 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 OR4F15Q8NGB8 312 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 SLC47A1Q96FL8 570 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
ALMS1-202ENST00000464408 DOK1Q99704 481 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 CCDC28BQ9BUN5 200 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 TMEM38AQ9H6F2 299 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 ZNF442Q9H7R0 627 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 ZNF224Q9NZL3 707 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 TESQ9UGI8 421 aaKnown RBP12.54□□□□□ -0.4
ALMS1-202ENST00000464408 GMEB1Q9Y692 573 aa12.54□□□□□ -0.4
ALMS1-202ENST00000464408 LOC102725191A0A1B0GVB3 256 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 LYNX1G3V0Z9 82 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 ERLIN1O75477 346 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 MFN2O95140 757 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 STAMBPO95630 424 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 THY1P04216 161 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 LYNX1P0DP58 116 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 DAOP14920 347 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 NPR2P20594 1047 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 SLC6A2P23975 617 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 ARR3P36575 388 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 NCALDP61601 193 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 PIGFQ07326 219 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 SNTB2Q13425 540 aaKnown RBP12.53□□□□□ -0.4
ALMS1-202ENST00000464408 CAMK2DQ13557 499 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 NPTX1Q15818 432 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 IQCCQ4KMZ1 466 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 FAM166AQ6J272 317 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 NET1Q7Z628 596 aaPredicted RBP12.53□□□□□ -0.4
ALMS1-202ENST00000464408 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
ALMS1-202ENST00000464408 KRT73Q86Y46 540 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 RBM45Q8IUH3 476 aaKnown RBP12.53□□□□□ -0.4
ALMS1-202ENST00000464408 ARMC8Q8IUR7 673 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 C10orf53Q8N6V4 93 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 OR4D11Q8NGI4 311 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 ZNF75AQ96N20 296 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 TMEM27Q9HBJ8 222 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
ALMS1-202ENST00000464408 PLPP3O14495 311 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 LYPD3O95274 346 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 ADRA2AP08913 450 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 CD79AP11912 226 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 B4GALT1P15291 398 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 ZNF23P17027 643 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 PPIBP23284 216 aaKnown RBP12.52□□□□□ -0.41
ALMS1-202ENST00000464408 PAX7P23759 505 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 PCBP3P57721 371 aaKnown RBP12.52□□□□□ -0.41
ALMS1-202ENST00000464408 PUDPQ08623 228 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 DAG1Q14118 895 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 MFSD13AQ14CX5 517 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 DUSP7Q16829 419 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 RUNDC3AQ59EK9 446 aa12.52□□□□□ -0.41
ALMS1-202ENST00000464408 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms