RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 OPN1LWP04000 364 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 ZNF883P0CG24 379 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 CASP3P42574 277 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 MELKQ14680 651 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 NTRK2Q16620 822 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 TIGD4Q8IY51 512 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 OR2Y1Q8NGV0 311 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 SPACA9Q96E40 222 aaPredicted RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 CMKLR1Q99788 373 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 INIPQ9NRY2 104 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 PPP4R1LQ9P1A2 415 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 ING1Q9UK53 422 aaPredicted RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 LOXL2Q9Y4K0 774 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 WIF1Q9Y5W5 379 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 A0A1W2PPK0 400 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 LOC110117498-PIK3R3F6TDL0 507 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 H3BML4 177 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 FLRT2O43155 660 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 SC5DO75845 299 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 STK17BO94768 372 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 AKR7A3O95154 331 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 AHSA1O95433 338 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 CD59P13987 128 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 AZGP1P25311 298 aaKnown RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 CCKBRP32239 447 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 GLYR1Q49A26 553 aaPredicted RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 TIPARPQ7Z3E1 657 aaKnown RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 CEACAM19Q7Z692 300 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 OR11G2Q8NGC1 345 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 POC1BQ8TC44 478 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 SLC22A8Q8TCC7 542 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 STK35Q8TDR2 534 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ST8SIA1Q92185 356 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 HSD17B8Q92506 261 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ATF6BQ99941 703 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 PDCD1LG2Q9BQ51 273 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ZNF700Q9H0M5 742 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 COMMD3Q9UBI1 195 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 CHCHD2Q9Y6H1 151 aaPredicted RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 COL27A1Q8IZC6 1860 aaPredicted RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 B4E171 279 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 TSPAN7P41732 249 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 TMED10P49755 219 aaKnown RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 OR10A3P58181 314 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 NANOS3P60323 173 aaKnown RBP11.55□□□□□ -0.56
VAPB-203ENST00000463370 ACTA2P62736 377 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ACTG2P63267 376 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 SIRPAP78324 504 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 CDK5R1Q15078 307 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 OR7A5Q15622 319 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ETFDHQ16134 617 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ZNF181Q2M3W8 571 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ZNF684Q5T5D7 378 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 GPR139Q6DWJ6 353 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 IL20RBQ6UXL0 311 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 SYS1Q8N2H4 156 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 ZNF519Q8TB69 540 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 WDFY2Q96P53 400 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 TMEM185BQ9H7F4 350 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 PCDHGB2Q9Y5G2 931 aa11.55□□□□□ -0.56
VAPB-203ENST00000463370 A0A1W2PNU3 283 aaPredicted RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 OGG1O15527 345 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 CYC1P08574 325 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 GAAP10253 952 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 IMPDH2P12268 514 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 GALP22466 123 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 HTR3AP46098 478 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 GDI2P50395 445 aaKnown RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 TAS2R43P59537 309 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 RPS11P62280 158 aaKnown RBP eCLIP11.54□□□□□ -0.56
VAPB-203ENST00000463370 INSM1Q01101 510 aaPredicted RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 PLPPR5Q32ZL2 321 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 ACSM3Q53FZ2 586 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 EEF1A1P5Q5VTE0 462 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 SYT9Q86SS6 491 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 WDSUB1Q8N9V3 476 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 THAP4Q8WY91 577 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 SMIM19Q96E16 107 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 TSPAN10Q9H1Z9 355 aaPredicted RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 ZNF160Q9HCG1 818 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 PCDHGB7Q9Y5F8 929 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 EXPH5Q8NEV8 1989 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 MS4A18H0YCH9 400 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 SSX4O60224 188 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 OR8G3PP0DMU2 310 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 SPNP16150 400 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 MAGEB1P43366 347 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 SUMO3P55854 103 aaPredicted RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 RPL27P61353 136 aaKnown RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 BAK1Q16611 211 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 MS4A18Q3C1V0 323 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 DCAF12Q5T6F0 453 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 SLC16A9Q7RTY1 509 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 DPY19L4Q7Z388 723 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 PXKQ7Z7A4 578 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 OR2T4Q8NH00 348 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 AMELYQ99218 206 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms