RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 IL17RDQ8NFM7 739 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 RP9Q8TA86 221 aaKnown RBP17.13■□□□□ 0.33
VARS-221ENST00000463184 SEC61A2Q9H9S3 476 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 CACYBPQ9HB71 228 aaKnown RBP17.13■□□□□ 0.33
VARS-221ENST00000463184 SLC25A37Q9NYZ2 338 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 GMEB1Q9Y692 573 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 TRBV5-3A0A0A0MS03 114 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 FTCDNL1E5RQL4 147 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 FBP2O00757 339 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 ZNF432O94892 652 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 BCHEP06276 602 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 PNMTP11086 282 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 PRG2P13727 222 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 ARR3P36575 388 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 CRATP43155 626 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 MVDP53602 400 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 CLDN17P56750 224 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 ARF1P84077 181 aaKnown RBP17.12■□□□□ 0.33
VARS-221ENST00000463184 NFYCQ13952 458 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 MMEL1Q495T6 779 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 DHDDSQ86SQ9 333 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 CCDC36Q8IYA8 594 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 KDM8Q8N371 416 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 SVOPLQ8N434 492 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 UBASH3BQ8TF42 649 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 SLC38A5Q8WUX1 472 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 SLC25A36Q96CQ1 311 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 OXGR1Q96P68 337 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 SPATA9Q9BWV2 254 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 THUMPD1Q9NXG2 353 aaKnown RBP17.12■□□□□ 0.33
VARS-221ENST00000463184 VAPAQ9P0L0 249 aa17.12■□□□□ 0.33
VARS-221ENST00000463184 IGHV2OR16-5A0A0B4J2B6 119 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 A0A0G2JPF8 293 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 TMEM129A0AVI4 362 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 HNRNPCL2B2RXH8 293 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 HNRNPCL3B7ZW38 293 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 HNRNPCL1O60812 293 aaKnown RBP17.11■□□□□ 0.33
VARS-221ENST00000463184 SLC43A1O75387 559 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 DCTN3O75935 186 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 CELA3BP08861 270 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 HNRNPCL4P0DMR1 293 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 COX4I1P13073 169 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 ETFAP13804 333 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 APEX1P27695 318 aaKnown RBP17.11■□□□□ 0.33
VARS-221ENST00000463184 GTF2E2P29084 291 aaKnown RBP17.11■□□□□ 0.33
VARS-221ENST00000463184 IL2RGP31785 369 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 SRP14P37108 136 aaKnown RBP17.11■□□□□ 0.33
VARS-221ENST00000463184 DSTNP60981 165 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 RGNQ15493 299 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 ADRM1Q16186 407 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 RUNDC3AQ59EK9 446 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 SERPINA11Q86U17 422 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 ZCCHC24Q8N2G6 241 aaKnown RBP17.11■□□□□ 0.33
VARS-221ENST00000463184 GPR137CQ8N3F9 429 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 C1orf159Q96HA4 380 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 CGREF1Q99674 301 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 PTDSS2Q9BVG9 487 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 GPR35Q9HC97 309 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 DYNLRB1Q9NP97 96 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.11■□□□□ 0.33
VARS-221ENST00000463184 CORO2BQ9UQ03 480 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 IFT52Q9Y366 437 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 CHST2Q9Y4C5 530 aa17.11■□□□□ 0.33
VARS-221ENST00000463184 SH3PXD2BA1X283 911 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 TMEM247A6NEH6 219 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 EVPLLA8MZ36 301 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 MRASO14807 208 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 NPPAP01160 153 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 RPS5P46782 204 aaKnown RBP17.1■□□□□ 0.33
VARS-221ENST00000463184 CDH15P55291 814 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 EGR4Q05215 589 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 FADDQ13158 208 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 RIN1Q13671 783 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 REP15Q6BDI9 236 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 MYPOPQ86VE0 399 aaPredicted RBP17.1■□□□□ 0.33
VARS-221ENST00000463184 TREML1Q86YW5 311 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 PCYOX1LQ8NBM8 494 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 CCDC197Q8NCU1 140 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 SLC35B4Q969S0 331 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 LRRC37BQ96QE4 947 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 SNX18Q96RF0 628 aa17.1■□□□□ 0.33
VARS-221ENST00000463184 FZD7O75084 574 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 IFNGR1P15260 489 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 PCMT1P22061 227 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 PRDX6P30041 224 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 POU3F1Q03052 451 aaPredicted RBP17.09■□□□□ 0.33
VARS-221ENST00000463184 NPRL3Q12980 569 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 C1DQ13901 141 aaKnown RBP17.09■□□□□ 0.33
VARS-221ENST00000463184 DAG1Q14118 895 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 CEACAM16Q2WEN9 425 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 TRMT5Q32P41 509 aaKnown RBP17.09■□□□□ 0.33
VARS-221ENST00000463184 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
VARS-221ENST00000463184 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 KTI12Q96EK9 354 aaPredicted RBP17.09■□□□□ 0.33
VARS-221ENST00000463184 TMEM19Q96HH6 336 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 CRLF2Q9HC73 371 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 B3GAT1Q9P2W7 334 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 USP22Q9UPT9 525 aa17.09■□□□□ 0.33
VARS-221ENST00000463184 CMAHPQ9Y471 501 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms