RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 OR6A2O95222 327 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 IGKV3-15P01624 115 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 IGLV1-44P01699 117 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 CSF3P09919 207 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 TROVE2P10155 538 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPRF-210ENST00000463041 CBLP22681 906 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 PCGF2P35227 344 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 ARR3P36575 388 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 SERPINF1P36955 418 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 GZMMP51124 257 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 ARFIP2P53365 341 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 MTPNP58546 118 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 NAAAQ02083 359 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 PUDPQ08623 228 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 VMACQ2NL98 169 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 CEACAM16Q2WEN9 425 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 COQ5Q5HYK3 327 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 ENTPD8Q5MY95 495 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 TTC33Q6PID6 262 aaPredicted RBP6.34□□□□□ -1.39
PTPRF-210ENST00000463041 ZNF627Q7L945 461 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
PTPRF-210ENST00000463041 TMEM123Q8N131 208 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 C10orf53Q8N6V4 93 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 GPR32P1Q8NGA4 272 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 OR6T1Q8NGN1 323 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 OR10A6Q8NH74 314 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 SLC26A7Q8TE54 656 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 PROX1Q92786 737 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 LRRC58Q96CX6 371 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 MPP4Q96JB8 637 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 ALKBH3Q96Q83 286 aaPredicted RBP6.34□□□□□ -1.39
PTPRF-210ENST00000463041 ECSITQ9BQ95 431 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 PCDHAC1Q9H158 963 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 NELFAQ9H3P2 528 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 DENND2DQ9H6A0 471 aaPredicted RBP6.34□□□□□ -1.39
PTPRF-210ENST00000463041 CRLF2Q9HC73 371 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 B3GAT2Q9NPZ5 323 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 GID8Q9NWU2 228 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 SEC14L4Q9UDX3 406 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 POFUT2Q9Y2G5 429 aa6.34□□□□□ -1.39
PTPRF-210ENST00000463041 IGHV4-30-2A0A087WSY4 118 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 BBIP1A8MTZ0 92 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 M0R3G1 203 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 M0R3H8 397 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 FBP2O00757 339 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 CD5LO43866 347 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 CRLF1O75462 422 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 SASH3O75995 380 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 HPRP00739 348 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 IFNA14P01570 189 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 HIST1H2ABP04908 130 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 CECR9P0C854 216 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 ADORA3P0DMS8 318 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 HLA-DOBP13765 273 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 SLC25A16P16260 332 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 CD247P20963 164 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 AHCYP23526 432 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 POU3F1Q03052 451 aaPredicted RBP6.33□□□□□ -1.4
PTPRF-210ENST00000463041 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 LOXL1Q08397 574 aaPredicted RBP6.33□□□□□ -1.4
PTPRF-210ENST00000463041 KLF10Q13118 480 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 SELPLGQ14242 412 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 MAPRE2Q15555 327 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 NPTX1Q15818 432 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 TRMT5Q32P41 509 aaKnown RBP6.33□□□□□ -1.4
PTPRF-210ENST00000463041 MMEL1Q495T6 779 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 ERICH5Q6P6B1 374 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 HIST3H2AQ7L7L0 130 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 CALHM3Q86XJ0 350 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 PCYOX1LQ8NBM8 494 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 MAPK1IP1LQ8NDC0 245 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 NUP37Q8NFH4 326 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 OR8J3Q8NGG0 315 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 OR6N1Q8NGY5 312 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 OR5J2Q8NH18 312 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 OR6X1Q8NH79 312 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 ADAMTS16Q8TE57 1224 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 FAM168AQ92567 244 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 HIST1H2ACQ93077 130 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 ZNF837Q96EG3 531 aaPredicted RBP6.33□□□□□ -1.4
PTPRF-210ENST00000463041 TXNDC15Q96J42 360 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 MOGAT1Q96PD6 335 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 TNFRSF13CQ96RJ3 184 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 EMC6Q9BV81 110 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 TMEM120AQ9BXJ8 343 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 SLC19A3Q9BZV2 496 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 POLR2J2Q9GZM3 115 aaKnown RBP6.33□□□□□ -1.4
PTPRF-210ENST00000463041 POLR2J3Q9H1A7 115 aaKnown RBP6.33□□□□□ -1.4
PTPRF-210ENST00000463041 NANSQ9NR45 359 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 CA10Q9NS85 328 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 B3GNT2Q9NY97 397 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 TAS2R5Q9NYW4 299 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 BAG5Q9UL15 447 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 USP22Q9UPT9 525 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 SPEF1Q9Y4P9 236 aa6.33□□□□□ -1.4
PTPRF-210ENST00000463041 LOC100653049A0A140TA62 436 aa6.32□□□□□ -1.4
PTPRF-210ENST00000463041 HTR3EA5X5Y0 456 aa6.32□□□□□ -1.4
PTPRF-210ENST00000463041 CPSF4LA6NMK7 179 aaKnown RBP6.32□□□□□ -1.4
PTPRF-210ENST00000463041 LRRN3E7EW58 273 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms