RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 ADRM1Q16186 407 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 GSTA3Q16772 222 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 COX20Q5RI15 118 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 MRPL2Q5T653 305 aaKnown RBP13.53□□□□□ -0.24
SND1-203ENST00000463020 ATAD3BQ5T9A4 648 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 NIPAL3Q6P499 406 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 HACD2Q6Y1H2 254 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 RNF130Q86XS8 419 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 MIER2Q8N344 545 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 PCYOX1LQ8NBM8 494 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 ZNF540Q8NDQ6 660 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 NUP37Q8NFH4 326 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 OR8J2Q8NGG1 315 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 NEURL3Q96EH8 262 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 NOX3Q9HBY0 568 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 OBP2BQ9NPH6 170 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 ASIC5Q9NY37 505 aa13.53□□□□□ -0.24
SND1-203ENST00000463020 ZNF587BE7ETH6 402 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 FRS3O43559 492 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 IFNGR1P15260 489 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 NPR2P20594 1047 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 FKBP2P26885 142 aaKnown RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 ACAA2P42765 397 aaKnown RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 CDKN2CP42773 168 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 KHKP50053 298 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 DVL1P1P54792 670 aaPredicted RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 UBE2NP61088 152 aaKnown RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 PSME3P61289 254 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 ARF1P84077 181 aaKnown RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 ROR2Q01974 943 aaKnown RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 SPANXN4Q5MJ08 99 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 ELFN2Q5R3F8 820 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 REP15Q6BDI9 236 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 C1orf229Q6ZS94 237 aaPredicted RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 WDFY1Q8IWB7 410 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 CLDND2Q8NHS1 167 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 UBASH3BQ8TF42 649 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 OIT3Q8WWZ8 545 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 TEX37Q96LM6 180 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 SLC35A5Q9BS91 424 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 SF3B5Q9BWJ5 86 aaKnown RBP13.52□□□□□ -0.25
SND1-203ENST00000463020 ZNF442Q9H7R0 627 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 AKTIPQ9H8T0 292 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 METRNQ9UJH8 293 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 LRCH1Q9Y2L9 728 aa13.52□□□□□ -0.25
SND1-203ENST00000463020 FAAHO00519 579 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 MRASO14807 208 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 KRT33AO76009 404 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 AVPP01185 164 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 GPIP06744 558 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 IDO1P14902 403 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 COL8A2P25067 703 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 COMPP49747 757 aaPredicted RBP13.51□□□□□ -0.25
SND1-203ENST00000463020 IL1RL1Q01638 556 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 FLOT2Q14254 428 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 PHYHD1Q5SRE7 291 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 KRT80Q6KB66 452 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 ZNF836Q6ZNA1 936 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 DHDDSQ86SQ9 333 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 MDP1Q86V88 176 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 VRK2Q86Y07 508 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 PNPT1Q8TCS8 783 aaKnown RBP13.51□□□□□ -0.25
SND1-203ENST00000463020 NEU4Q8WWR8 484 aaPredicted RBP13.51□□□□□ -0.25
SND1-203ENST00000463020 PMM1Q92871 262 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 ZNF184Q99676 751 aaPredicted RBP13.51□□□□□ -0.25
SND1-203ENST00000463020 ADA2Q9NZK5 511 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 MYEF2Q9P2K5 600 aaKnown RBP13.51□□□□□ -0.25
SND1-203ENST00000463020 NDUFAF1Q9Y375 327 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 CHST2Q9Y4C5 530 aa13.51□□□□□ -0.25
SND1-203ENST00000463020 PRKDCP78527 4128 aaKnown RBP13.51□□□□□ -0.25
SND1-203ENST00000463020 PRSS51A0A1B0GVH4 220 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 OR6C65A6NJZ3 312 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 NPIPB7O75200 414 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 AGR2O95994 175 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 HPXP02790 462 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 TCN1P20061 433 aaPredicted RBP13.5□□□□□ -0.25
SND1-203ENST00000463020 NPRL3Q12980 569 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 SNTB2Q13425 540 aaKnown RBP13.5□□□□□ -0.25
SND1-203ENST00000463020 C3orf36Q3SXR2 165 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 C1QTNF12Q5T7M4 302 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 LRP11Q86VZ4 500 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 OR4F15Q8NGB8 312 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 MAGEE2Q8TD90 523 aaPredicted RBP13.5□□□□□ -0.25
SND1-203ENST00000463020 TSPEARQ8WU66 669 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 NRG4Q8WWG1 115 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 PYDC1Q8WXC3 89 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 YIPF5Q969M3 257 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 TRNT1Q96Q11 434 aaKnown RBP13.5□□□□□ -0.25
SND1-203ENST00000463020 PTDSS2Q9BVG9 487 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 MRPL37Q9BZE1 423 aaKnown RBP13.5□□□□□ -0.25
SND1-203ENST00000463020 RACGAP1Q9H0H5 632 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 DYNLRB1Q9NP97 96 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 SLC6A13Q9NSD5 602 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 HIF1ANQ9NWT6 349 aa13.5□□□□□ -0.25
SND1-203ENST00000463020 GID8Q9NWU2 228 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms