RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 CDH11P55287 796 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 SH3BGRP55822 239 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 UBE2NP61088 152 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 TBRG1Q3YBR2 411 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 ZNF672Q499Z4 452 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 GKAP1Q5VSY0 366 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 TMEM123Q8N131 208 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 ZNF611Q8N823 705 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 LILRB1Q8NHL6 650 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 TMEM171Q8WVE6 324 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 SGTBQ96EQ0 304 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 PIP5K1AQ99755 562 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 FNDC11Q9BVV2 318 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 GPR35Q9HC97 309 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 B3GAT2Q9NPZ5 323 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 RPS6KA6Q9UK32 745 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 POU2F3Q9UKI9 436 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 MGAT4BQ9UQ53 548 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 MED31Q9Y3C7 131 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 DSCAMO60469 2012 aa16.23■□□□□ 0.19
CDKN1A-206ENST00000462537 A0A096LPE4 126 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 A0A1W2PPZ6 126 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 BLOC1S5-TXNDC5H3BN57 136 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 J3KTA2 159 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 OR7A10O76100 309 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 ASAH2BP0C7U1 165 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 IFNGR1P15260 489 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 TCN1P20061 433 aaPredicted RBP16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 CAMK2DQ13557 499 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 CEACAM16Q2WEN9 425 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 GLYATQ6IB77 296 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 ANKRD16Q6P6B7 361 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 SLC22A25Q6T423 547 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 SLC35D2Q76EJ3 337 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 SLC46A3Q7Z3Q1 461 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 ANKS4BQ8N8V4 417 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 FAM156AQ8NDB6 213 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 ANKK1Q8NFD2 765 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 OR6N1Q8NGY5 312 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 CRLF2Q9HC73 371 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 TAS2R5Q9NYW4 299 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 RHCGQ9UBD6 479 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 A4GNTQ9UNA3 340 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 LAMP3Q9UQV4 416 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 SNX13Q9Y5W8 968 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 CELSR1Q9NYQ6 3014 aa16.22■□□□□ 0.19
CDKN1A-206ENST00000462537 RPL36A-HNRNPH2H7BZ11 118 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 FUT1P19526 365 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 CD40P25942 277 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 BIDP55957 195 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 NKX6-1P78426 367 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 ARF1P84077 181 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 SPOCK1Q08629 439 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 ZP4Q12836 540 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 C16orf89Q6UX73 402 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 CYP4Z1Q86W10 505 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 C20orf196Q8IYI0 205 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 PGAM4Q8N0Y7 254 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 DEPDC4Q8N2C3 294 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 RBM15BQ8NDT2 890 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 BCL2L2Q92843 193 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 PERPQ96FX8 193 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 RADILQ96JH8 1075 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 CXorf56Q9H5V9 222 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 OBP2BQ9NPH6 170 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 C20orf141Q9NUB4 165 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 NDE1Q9NXR1 346 aa16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 CISD1Q9NZ45 108 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-206ENST00000462537 SHISA9B4DS77 424 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 PIP5K1CO60331 668 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 SEC14L2O76054 403 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 FAM107AO95990 144 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 CSNK1A1P48729 337 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 TUBA1BP68363 451 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 TUBA4AP68366 448 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 MELKQ14680 651 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 PHYHD1Q5SRE7 291 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 C1QTNF12Q5T7M4 302 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 TUBA1AQ71U36 451 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 TGIF2LYQ8IUE0 185 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 OFCC1Q8IZS5 231 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 CCDC197Q8NCU1 140 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 SMAP2Q8WU79 429 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 ZNF837Q96EG3 531 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 LRR1Q96L50 414 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 ADAD1Q96M93 576 aaKnown RBP16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 CDRT15Q96T59 188 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 ULBP2Q9BZM5 246 aa16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 SAMD4AQ9UPU9 718 aaKnown RBP16.2■□□□□ 0.18
CDKN1A-206ENST00000462537 PRRC2AP48634 2157 aaKnown RBP16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 ARHGEF9O43307 516 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 F13BP05160 661 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 IFI30P13284 250 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 CAPZA2P47755 286 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 MNAT1P51948 309 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 ADAM8P78325 824 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 RPL18Q07020 188 aaKnown RBP16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 TRAM2Q15035 370 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 Q5PR19 223 aa16.19■□□□□ 0.18
CDKN1A-206ENST00000462537 SAMD4BQ5PRF9 694 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms