RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 CA10Q9NS85 328 aa12.15□□□□□ -0.46
USP4-206ENST00000461553 MRPL39Q9NYK5 338 aaKnown RBP12.15□□□□□ -0.46
USP4-206ENST00000461553 NOX1Q9Y5S8 564 aa12.15□□□□□ -0.46
USP4-206ENST00000461553 M0QX08 132 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 TLX2O43763 284 aaPredicted RBP12.14□□□□□ -0.47
USP4-206ENST00000461553 CD5LO43866 347 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 TPST2O60704 377 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 SERPINI2O75830 405 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 SEC14L2O76054 403 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 PDE5AO76074 875 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 HPRP00739 348 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 MT-ATP6P00846 226 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 IGKV3-15P01624 115 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 IGLV1-44P01699 117 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 SLC25A16P16260 332 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 AHCYP23526 432 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
USP4-206ENST00000461553 EFNA4P52798 201 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 NPRL3Q12980 569 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 DUSP7Q16829 419 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 ENTPD8Q5MY95 495 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 SLC46A3Q7Z3Q1 461 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 SNX32Q86XE0 403 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 GPR32P1Q8NGA4 272 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 OR6T1Q8NGN1 323 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 OR5J2Q8NH18 312 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 FAM168AQ92567 244 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 MED29Q9NX70 200 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 USP22Q9UPT9 525 aa12.14□□□□□ -0.47
USP4-206ENST00000461553 MALRD1Q5VYJ5 2156 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 BBIP1A8MTZ0 92 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 SASH3O75995 380 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 OR6A2O95222 327 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 ADORA3P0DMS8 318 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 HLA-DOBP13765 273 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 CD247P20963 164 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 ARR3P36575 388 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 CYLC2Q14093 348 aaPredicted RBP12.13□□□□□ -0.47
USP4-206ENST00000461553 MAPRE2Q15555 327 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 NPTX1Q15818 432 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 VMACQ2NL98 169 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 TTC33Q6PID6 262 aaPredicted RBP12.13□□□□□ -0.47
USP4-206ENST00000461553 VHLLQ6RSH7 139 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 PRIMA1Q86XR5 153 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 CCDC36Q8IYA8 594 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 C20orf196Q8IYI0 205 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 ADAMTS16Q8TE57 1224 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
USP4-206ENST00000461553 TAMM41Q96BW9 452 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 SH3GL1Q99961 368 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 EMC6Q9BV81 110 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 ULBP2Q9BZM5 246 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 SEC61A2Q9H9S3 476 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 ATRQ13535 2644 aa12.13□□□□□ -0.47
USP4-206ENST00000461553 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 TRAPPC13A5PLN9 417 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 LRRN3E7EW58 273 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 C11orf98E9PRG8 122 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 KPNA4O00629 521 aaPredicted RBP12.12□□□□□ -0.47
USP4-206ENST00000461553 CRLF1O75462 422 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 CELA3BP08861 270 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 CBR1P16152 277 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 CALCRP30988 508 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 SERPINF1P36955 418 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 CSNK1A1P48729 337 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 ARFIP2P53365 341 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 COQ5Q5HYK3 327 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 PHYHD1Q5SRE7 291 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 REP15Q6BDI9 236 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 ZNF813Q6ZN06 617 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 PXKQ7Z7A4 578 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 MDP1Q86V88 176 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 OR8J3Q8NGG0 315 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 PROX1Q92786 737 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 ZNF837Q96EG3 531 aaPredicted RBP12.12□□□□□ -0.47
USP4-206ENST00000461553 MPP4Q96JB8 637 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 LRR1Q96L50 414 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 SORCS2Q96PQ0 1159 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 YAE1D1Q9NRH1 226 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 FGFR1OP2Q9NVK5 253 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 SLC7A7Q9UM01 511 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 POFUT2Q9Y2G5 429 aa12.12□□□□□ -0.47
USP4-206ENST00000461553 A0A096LNT2 108 aa12.11□□□□□ -0.47
USP4-206ENST00000461553 B9A039 149 aa12.11□□□□□ -0.47
USP4-206ENST00000461553 FBP2O00757 339 aa12.11□□□□□ -0.47
USP4-206ENST00000461553 PLPP3O14495 311 aa12.11□□□□□ -0.47
USP4-206ENST00000461553 MRASO14807 208 aa12.11□□□□□ -0.47
USP4-206ENST00000461553 OR4A8P0C604 315 aa12.11□□□□□ -0.47
USP4-206ENST00000461553 UMPSP11172 480 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms