RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 ZNF317Q96PQ6 595 aaPredicted RBP6.11□□□□□ -1.43
NUP50-212ENST00000461194 SPATA5L1Q9BVQ7 753 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 RSPO3Q9BXY4 272 aaPredicted RBP6.11□□□□□ -1.43
NUP50-212ENST00000461194 POTEKPQ9BYX7 375 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 OR11A1Q9GZK7 315 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 OR10A4Q9H209 315 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 SAR1AQ9NR31 198 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 PARPBPQ9NWS1 579 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 KLHL28Q9NXS3 571 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 ZNF226Q9NYT6 803 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 TMEM181Q9P2C4 612 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 GPR52Q9Y2T5 361 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 ANKHD1Q8IWZ3 2542 aaKnown RBP6.11□□□□□ -1.43
NUP50-212ENST00000461194 MED12LQ86YW9 2145 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 DCHS2Q6V1P9 2916 aa6.11□□□□□ -1.43
NUP50-212ENST00000461194 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 PRORSD1PA6NEY8 169 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 ZNF716A6NP11 495 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 VSTM5A8MXK1 200 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 F2RL2O00254 374 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 FBP2O00757 339 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 EIF1BO60739 113 aaKnown RBP6.1□□□□□ -1.43
NUP50-212ENST00000461194 SERPINB7O75635 380 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 PRSS23O95084 383 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 PPP3CBP16298 524 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 PSMB1P20618 241 aaKnown RBP6.1□□□□□ -1.43
NUP50-212ENST00000461194 CRYGSP22914 178 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 CXCR1P25024 350 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 OR2B6P58173 313 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 MTPNP58546 118 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 SLC35A1P78382 337 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 H3F3AP84243 136 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 SF3A3Q12874 501 aaKnown RBP eCLIP6.1□□□□□ -1.43
NUP50-212ENST00000461194 KLF10Q13118 480 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 SELPLGQ14242 412 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 MAPRE2Q15555 327 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 TRMT5Q32P41 509 aaKnown RBP6.1□□□□□ -1.43
NUP50-212ENST00000461194 GFOD2Q3B7J2 385 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 NET1Q7Z628 596 aaPredicted RBP6.1□□□□□ -1.43
NUP50-212ENST00000461194 GALNT5Q7Z7M9 940 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 CDC20BQ86Y33 519 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 PTOV1Q86YD1 416 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 GABRG1Q8N1C3 465 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 CADM2Q8N3J6 435 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 FITM2Q8N6M3 262 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 LSMEM1Q8N8F7 131 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 C11orf65Q8NCR3 313 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 PIGXQ8TBF5 258 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 C10orf82Q8WW14 230 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 C3orf49Q96BT1 292 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 ZNF300Q96RE9 604 aaPredicted RBP6.1□□□□□ -1.43
NUP50-212ENST00000461194 ZNF607Q96SK3 696 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 SH3GL1Q99961 368 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 MED18Q9BUE0 208 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 HDHD5Q9BXW7 423 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 KLHL4Q9C0H6 718 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 KAT8Q9H7Z6 458 aaKnown RBP6.1□□□□□ -1.43
NUP50-212ENST00000461194 FAM30AQ9NZY2 134 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 EMC3Q9P0I2 261 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 ANGPT4Q9Y264 503 aa6.1□□□□□ -1.43
NUP50-212ENST00000461194 HEATR5AQ86XA9 2040 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 LOC100653049A0A140TA62 436 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 A0A1W2PPR1 153 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 BBIP1A8MTZ0 92 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 A8MVM7 634 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 DEFB108AA8MXU0 73 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 ZNF814B7Z6K7 855 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 M0QX08 132 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 FXYD1O00168 92 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 GPR171O14626 319 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 SLC22A2O15244 555 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 FRS3O43559 492 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 TPST1O60507 370 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 NPIPB7O75200 414 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 SLC43A1O75387 559 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 GCM2O75603 506 aaPredicted RBP6.09□□□□□ -1.43
NUP50-212ENST00000461194 KRT34O76011 436 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 MFN2O95140 757 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 NPPAP01160 153 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 GPIP06744 558 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 AQP1P29972 269 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 IDUAP35475 653 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 OR3A2P47893 321 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 GZMMP51124 257 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 DGCR2P98153 550 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 HOXC5Q00444 222 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 DMTNQ08495 405 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 CEACAM7Q14002 265 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 CYLC2Q14093 348 aaPredicted RBP6.09□□□□□ -1.43
NUP50-212ENST00000461194 CAPRIN1Q14444 709 aaKnown RBP6.09□□□□□ -1.43
NUP50-212ENST00000461194 P2RY6Q15077 328 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 CYP51A1Q16850 503 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 MMEL1Q495T6 779 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 GLIPR1L2Q4G1C9 344 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 REP15Q6BDI9 236 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 NANOGP8Q6NSW7 305 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 PAQR6Q6TCH4 344 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 C6orf89Q6UWU4 347 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 Q6ZT83 130 aa6.09□□□□□ -1.43
NUP50-212ENST00000461194 COMTD1Q86VU5 262 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms