RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 CLDN16Q9Y5I7 305 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
SCFD1-203ENST00000458591 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 CTDSPLO15194 276 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 PRAF2O60831 178 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 APBB3O95704 486 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 RRASP10301 218 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
SCFD1-203ENST00000458591 TNFRSF4P43489 277 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 EPHA4P54764 986 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 CSRP2Q16527 193 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 ZNF684Q5T5D7 378 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 FAM69AQ5T7M9 428 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 OR5M10Q6IEU7 315 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 OR4D10Q8NGI6 311 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 HOXB13Q92826 284 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-203ENST00000458591 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-203ENST00000458591 AMELYQ99218 206 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 WDR76Q9H967 626 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 TMEM184BQ9Y519 407 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-203ENST00000458591 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 UPK3AO75631 287 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 GLCEO94923 617 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 MAOBP27338 520 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 ITPKBP27987 946 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 PTGS2P35354 604 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 EFNB2P52799 333 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 CTXN1P60606 82 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 GUCA2AQ02747 115 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 ILF3Q12906 894 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCFD1-203ENST00000458591 ZNF141Q15928 474 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 TMEM65Q6PI78 240 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 FAM198BQ6UWH4 519 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 ZNF550Q7Z398 422 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 BIVMQ86UB2 503 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 GLB1L2Q8IW92 636 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 LSM14AQ8ND56 463 aaKnown RBP12.88□□□□□ -0.35
SCFD1-203ENST00000458591 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 RXFP3Q9NSD7 469 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 CACNA1CQ13936 2221 aa12.88□□□□□ -0.35
SCFD1-203ENST00000458591 GABARAPH6UMI1 98 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 MST1P26927 711 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 TPMTP51580 245 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 LGALS3BPQ08380 585 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 MFSD13AQ14CX5 517 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 TMPRSS12Q86WS5 348 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 ADGRG3Q86Y34 549 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 UXS1Q8NBZ7 420 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 ELSPBP1Q96BH3 223 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 GAL3ST1Q99999 423 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 RTN4RQ9BZR6 473 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
SCFD1-203ENST00000458591 NANSQ9NR45 359 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 POLE3Q9NRF9 147 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 IKZF2Q9UKS7 526 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 SCML1Q9UN30 329 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 ZNF337Q9Y3M9 751 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 DOK2O60496 412 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 TGM6O95932 706 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 PROS1P07225 676 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 GPR143P51810 404 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 TAS2R20P59543 309 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 AP3S2P59780 193 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 UBE2IP63279 158 aaKnown RBP12.87□□□□□ -0.35
SCFD1-203ENST00000458591 EGR4Q05215 589 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 SLC35F3Q8IY50 421 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 ARHGEF39Q8N4T4 335 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 GALNT11Q8NCW6 608 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 KTI12Q96EK9 354 aaPredicted RBP12.87□□□□□ -0.35
SCFD1-203ENST00000458591 S100A16Q96FQ6 103 aaKnown RBP12.87□□□□□ -0.35
SCFD1-203ENST00000458591 GSX2Q9BZM3 304 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 PLEKHA1Q9HB21 404 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 TAS2R10Q9NYW0 307 aa12.87□□□□□ -0.35
SCFD1-203ENST00000458591 A0A1W2PPL8 197 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 ANKRD20A5PA0PJZ0 165 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 PYCARD-AS1I3L0S3 204 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 AKR7A3O95154 331 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 ECDO95905 644 aaPredicted RBP12.86□□□□□ -0.35
SCFD1-203ENST00000458591 IFNA16P05015 189 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 CBFBQ13951 182 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 OPCMLQ14982 345 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 METTL11BQ5VVY1 283 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 C1QL3Q5VWW1 255 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 MCATQ8IVS2 390 aaKnown RBP12.86□□□□□ -0.35
SCFD1-203ENST00000458591 DND1Q8IYX4 353 aaKnown RBP12.86□□□□□ -0.35
SCFD1-203ENST00000458591 OR6V1Q8N148 313 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 OR5AK2Q8NH90 309 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
SCFD1-203ENST00000458591 CMTM3Q96MX0 182 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms