RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NOX3Q9HBY0 568 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 B3GNT2Q9NY97 397 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 SELENONQ9NZV5 590 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 A0A1B0GWA3 101 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 TMEM120BA0PK00 339 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 SH3PXD2BA1X283 911 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 TRAF3IP2O43734 574 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-220ENST00000458038 SYNGR3O43761 229 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 ADRA2AP08913 450 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 SRP14P37108 136 aaKnown RBP18.59■□□□□ 0.57
CPNE1-220ENST00000458038 ALG10BQ5I7T1 473 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 REP15Q6BDI9 236 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 DHRS4L2Q6PKH6 230 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 ZCCHC24Q8N2G6 241 aaKnown RBP18.59■□□□□ 0.57
CPNE1-220ENST00000458038 GOLGA6L1Q8N7Z2 621 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 BHLHE22Q8NFJ8 381 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-220ENST00000458038 MAL2Q969L2 176 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 ZNF837Q96EG3 531 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-220ENST00000458038 SLC41A3Q96GZ6 507 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 EVA1AQ9H8M9 152 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 SEC14L4Q9UDX3 406 aa18.59■□□□□ 0.57
CPNE1-220ENST00000458038 MS4A18H0YCH9 400 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 NQO1P15559 274 aaKnown RBP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 PPIBP23284 216 aaKnown RBP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 DVL1P1P54792 670 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 CDH15P55291 814 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 RPS23P62266 143 aaKnown RBP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 GSG1Q2KHT4 349 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 MS4A18Q3C1V0 323 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 REEP3Q6NUK4 255 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 C20orf196Q8IYI0 205 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 CDK20Q8IZL9 346 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 MRPL24Q96A35 216 aaKnown RBP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 SNX18Q96RF0 628 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 ASPNQ9BXN1 380 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 NKIRAS1Q9NYS0 192 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 KLHL14Q9P2G3 628 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 FBXL3Q9UKT7 428 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 NOX1Q9Y5S8 564 aa18.58■□□□□ 0.56
CPNE1-220ENST00000458038 V9GYY5 206 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-220ENST00000458038 ZNF503-AS2A6NEH8 195 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 PRORSD1PA6NEY8 169 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 M0R3G1 203 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 NUDT7P0C024 238 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 GLRXP35754 106 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 MRPL19P49406 292 aaKnown RBP18.57■□□□□ 0.56
CPNE1-220ENST00000458038 NCALDP61601 193 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 TRMT5Q32P41 509 aaKnown RBP18.57■□□□□ 0.56
CPNE1-220ENST00000458038 KRT80Q6KB66 452 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 OR9I1Q8NGQ6 314 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 OR52B2Q96RD2 323 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 TMEM27Q9HBJ8 222 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 REV1Q9UBZ9 1251 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 TESQ9UGI8 421 aaKnown RBP18.57■□□□□ 0.56
CPNE1-220ENST00000458038 RAB21Q9UL25 225 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 POFUT2Q9Y2G5 429 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 GMEB1Q9Y692 573 aa18.57■□□□□ 0.56
CPNE1-220ENST00000458038 IGKV1D-42A0A075B6H8 117 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 A0A087WUJ7 227 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 B4DSR2 109 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 M0R233 179 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 ENTPD5O75356 428 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 ARAFP10398 606 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 CD79AP11912 226 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 ZNF35P13682 527 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 HTR2AP28223 471 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 STX1BP61266 288 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 SRSF2Q01130 221 aaKnown RBP18.56■□□□□ 0.56
CPNE1-220ENST00000458038 ZNF607Q96SK3 696 aa18.56■□□□□ 0.56
CPNE1-220ENST00000458038 MRPL39Q9NYK5 338 aaKnown RBP18.56■□□□□ 0.56
CPNE1-220ENST00000458038 A0A0A6YYJ9 748 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 ZNF726A6NNF4 738 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 HLA-HP01893 362 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 IGFBP1P08833 259 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-220ENST00000458038 ZNF14P17017 642 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-220ENST00000458038 HOXB9P17482 250 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-220ENST00000458038 IL2RGP31785 369 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 CDK6Q00534 326 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 PUDPQ08623 228 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 SCGB2A2Q13296 93 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 PMS2P3Q13401 168 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 LRIF1Q5T3J3 769 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 GCNT6Q5T4J0 391 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 SWT1Q5T5J6 900 aaKnown RBP18.55■□□□□ 0.56
CPNE1-220ENST00000458038 SLC2A7Q6PXP3 512 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 ZNF813Q6ZN06 617 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 PXKQ7Z7A4 578 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 MGARPQ8TDB4 240 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 TMEM43Q9BTV4 400 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 SLC13A4Q9UKG4 626 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 CORO2BQ9UQ03 480 aa18.55■□□□□ 0.56
CPNE1-220ENST00000458038 SERPINB7O75635 380 aa18.54■□□□□ 0.56
CPNE1-220ENST00000458038 HPRP00739 348 aa18.54■□□□□ 0.56
CPNE1-220ENST00000458038 MRPS11P82912 194 aaKnown RBP18.54■□□□□ 0.56
CPNE1-220ENST00000458038 GALK2Q01415 458 aa18.54■□□□□ 0.56
CPNE1-220ENST00000458038 PHYHD1Q5SRE7 291 aa18.54■□□□□ 0.56
CPNE1-220ENST00000458038 CARD17Q5XLA6 110 aa18.54■□□□□ 0.56
CPNE1-220ENST00000458038 NHLRC1Q6VVB1 395 aa18.54■□□□□ 0.56
CPNE1-220ENST00000458038 MAVSQ7Z434 540 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms