RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 IGFBP5P24593 272 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 NR4A2P43354 598 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 NCALDP61601 193 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 DUSP7Q16829 419 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 ULK3Q6PHR2 472 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 NHLRC1Q6VVB1 395 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 SPATA21Q7Z572 469 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 KRT73Q86Y46 540 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 ARMC8Q8IUR7 673 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 UEVLDQ8IX04 471 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 C20orf196Q8IYI0 205 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 CDK20Q8IZL9 346 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 SPATA3Q8NHX4 192 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 VANGL1Q8TAA9 524 aaPredicted RBP13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 DNAJA4Q8WW22 397 aaPredicted RBP13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 PROX1Q92786 737 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 SLC35B4Q969S0 331 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 BPESC1Q9GZL8 116 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 PLK3Q9H4B4 646 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 TMEM38AQ9H6F2 299 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 TMEM27Q9HBJ8 222 aa13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 TESQ9UGI8 421 aaKnown RBP13.22□□□□□ -0.29
CROCCP4-201ENST00000457096 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 FBN3Q75N90 2809 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 OR6C65A6NJZ3 312 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 CPSF4LA6NMK7 179 aaKnown RBP13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 B9A039 149 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 hCG_2039718K7EN88 272 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 OR2T1O43869 369 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 SASH3O75995 380 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 PATE4P0C8F1 98 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 CD79AP11912 226 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 SH3BGRP55822 239 aaPredicted RBP13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 SF3A3Q12874 501 aaKnown RBP eCLIP13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 PMS2P3Q13401 168 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 SQLEQ14534 574 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 HIPK4Q8NE63 616 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 PIK3C3Q8NEB9 887 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 FGFBP3Q8TAT2 258 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 MSI2Q96DH6 328 aaKnown RBP13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 SLC41A3Q96GZ6 507 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 PIMREGQ9BSJ6 248 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 SPATA5L1Q9BVQ7 753 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 TPK1Q9H3S4 243 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 ZNF224Q9NZL3 707 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 PRDM4Q9UKN5 801 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 FKBP7Q9Y680 259 aa13.21□□□□□ -0.29
CROCCP4-201ENST00000457096 ZNF99A8MXY4 864 aaPredicted RBP13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 EVPLLA8MZ36 301 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 PLPP3O14495 311 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 PHF1O43189 567 aaPredicted RBP13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 LMX1BO60663 402 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 LYPD3O95274 346 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 CSF3P09919 207 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 FAM157CP0CG43 387 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 B4GALT1P15291 398 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 AHCYP23526 432 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 IL2RGP31785 369 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 PCBP3P57721 371 aaKnown RBP13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 SNTB2Q13425 540 aaKnown RBP13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 MFSD13AQ14CX5 517 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 FAM91A1Q658Y4 838 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 LRRC17Q8N6Y2 441 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 OR6T1Q8NGN1 323 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 ZNF607Q96SK3 696 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 DOK1Q99704 481 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 MCHR1Q99705 422 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 ARHGDIGQ99819 225 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 ASPNQ9BXN1 380 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 BEX2Q9BXY8 128 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 ZNF385DQ9H6B1 395 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 B3GNT2Q9NY97 397 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 SELENONQ9NZV5 590 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 SLC13A4Q9UKG4 626 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 FZR1Q9UM11 496 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 ANGPT4Q9Y264 503 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
CROCCP4-201ENST00000457096 LOC100289279A0A1B0GTE1 492 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 M0QX08 132 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 KPNA4O00629 521 aaPredicted RBP13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 IFNA2P01563 188 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 ADRA2AP08913 450 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 APEHP13798 732 aaKnown RBP13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 TCN1P20061 433 aaPredicted RBP13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 NPR2P20594 1047 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 ATP4BP51164 291 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 BIDP55957 195 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 PUDPQ08623 228 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 MELKQ14680 651 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 EFNB3Q15768 340 aa13.19□□□□□ -0.3
CROCCP4-201ENST00000457096 CYP51A1Q16850 503 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms