RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 KCNE3Q9Y6H6 103 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 PRRC2CQ9Y520 2896 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DOCK10Q96BY6 2186 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 MAP1BP46821 2468 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 WDFY3Q8IZQ1 3526 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SPAARA0A1B0GVQ0 90 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 DHRS12A0PJE2 317 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 GAGE12BA1L429 117 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 GAGE12HA6NDE8 117 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 VWC2LB2RUY7 222 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 IDSB3KWA1 339 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 M0QX08 132 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 HS3ST1O14792 307 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PLPP2O43688 288 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SSX4O60224 188 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 CNOT3O75175 753 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 NCR1O76036 304 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SOX30O94993 753 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SERPINA1P01009 418 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 IFNA16P05015 189 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 KLK3P07288 261 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 TNNI3P19429 210 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 FUT1P19526 365 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 CSRP1P21291 193 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 BMP5P22003 454 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 GCKP35557 465 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 EMDP50402 254 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 CRYBA2P53672 197 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 EMP2P54851 167 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC34A1Q06495 639 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 FUT7Q11130 342 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SNTB2Q13425 540 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 MELKQ14680 651 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 EXOSC7Q15024 291 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SNCBQ16143 134 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SYPL1Q16563 259 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 CYBRD1Q53TN4 286 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 HES3Q5TGS1 186 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 IRAK1BP1Q5VVH5 260 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 MLIPQ5VWP3 458 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PRAMEF7Q5VXH5 474 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 AP1ARQ63HQ0 302 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 FAM199XQ6PEV8 388 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ENPP6Q6UWR7 440 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ZNF517Q6ZMY9 492 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SHISA6Q6ZSJ9 500 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 GALNT10Q86SR1 603 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PATL1Q86TB9 770 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PRSS58Q8IYP2 241 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ZNF679Q8IYX0 411 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 FAM86B1Q8N7N1 296 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ZNF615Q8N8J6 731 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ANKFN1Q8N957 763 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 BOLLQ8N9W6 283 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 DRAXINQ8NBI3 349 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SCCPDHQ8NBX0 429 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC16A11Q8NCK7 471 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR56B1Q8NGI3 324 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR5D16Q8NGK9 328 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 FAM110BQ8TC76 370 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SNAPC3Q92966 411 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 TSLPQ969D9 159 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 RFKQ969G6 155 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 NCLNQ969V3 563 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 TMEM19Q96HH6 336 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PYURFQ96I23 114 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ZNF578Q96N58 590 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 MS4A4EQ96PG1 132 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR7D2Q96RA2 312 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 FNDC11Q9BVV2 318 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 DDA1Q9BW61 102 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 RSPO3Q9BXY4 272 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 UGT2B28Q9BY64 529 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ULBP3Q9BZM4 244 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 SPRY4Q9C004 299 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PIGUQ9H490 435 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 CRLF2Q9HC73 371 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 BCL2L10Q9HD36 194 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ADAP2Q9NPF8 381 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 AKIP1Q9NQ31 210 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 HINT3Q9NQE9 182 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PNO1Q9NRX1 252 aaKnown RBP4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 C14orf105Q9NVL8 296 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 GIN1Q9NXP7 522 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 DLL3Q9NYJ7 618 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 PADI2Q9Y2J8 665 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 MED13Q9UHV7 2174 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 ACACAQ13085 2346 aa4.68□□□□□ -1.66
HMGB1P4-201ENST00000455362 HEATR5AQ86XA9 2040 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 PCNX3Q9H6A9 2034 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 A8MUA0 341 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 AHRRA9YTQ3 701 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 C17orf105B2RV13 164 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 HNRNPCL2B2RXH8 293 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 C5orf58C9J3I9 102 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 M0QZ24 198 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 XRCC3O43542 346 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC28A2O43868 658 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 ALOX12BO75342 701 aa4.67□□□□□ -1.66
HMGB1P4-201ENST00000455362 STK17BO94768 372 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms