RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 GP6Q9HCN6 339 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 ADAM18Q9Y3Q7 739 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 MED12LQ86YW9 2145 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 DOCK7Q96N67 2140 aa14.77□□□□□ -0.04
CCDC90B-202ENST00000455220 LOC100130705A0A1B0GUX0 176 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 A0A1W2PRG6 482 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 MBD3L4A6NDZ8 208 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 MBD3L3A6NE82 208 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 MBD3L5A6NJ08 208 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 H0YAE9 185 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 IDH3BO43837 385 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 PLGP00747 810 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 GRK5P34947 590 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 CAPGP40121 348 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 RPS6KA3P51812 740 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 ERVK-25P63136 954 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 KEAP1Q14145 624 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 ACKR1Q16570 336 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 C1orf185Q5T7R7 199 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 TMEM236Q5W0B7 351 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 TTC23Q5W5X9 447 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 C12orf73Q69YU5 71 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 GPR139Q6DWJ6 353 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 GTF2IRD2BQ6EKJ0 949 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 ACSM5Q6NUN0 579 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 RPTNQ6XPR3 784 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 SEM1Q6ZVN7 128 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 SLC35D2Q76EJ3 337 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 GTF2IRD2Q86UP8 949 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 ZIC4Q8N9L1 334 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF555Q8NEP9 628 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 MBD3L2Q8NHZ7 208 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 TACO1Q9BSH4 297 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 IER3IP1Q9Y5U9 82 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 FLVCR1Q9Y5Y0 555 aa14.77□□□□□ -0.05
CCDC90B-202ENST00000455220 ARHGAP21Q5T5U3 1957 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF724A8MTY0 619 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 IFNGR1P15260 489 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 SDHAP31040 664 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 GGT2P36268 569 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 DAP3P51398 398 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 RPL27P61353 136 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 C1DQ13901 141 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 ARMC4Q5T2S8 1044 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 P4HA3Q7Z4N8 544 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF519Q8TB69 540 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 CYGBQ8WWM9 190 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 ERMAPQ96PL5 475 aaPredicted RBP14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 GLRX2Q9NS18 164 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 MED29Q9NX70 200 aa14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF346Q9UL40 294 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-202ENST00000455220 GPR171O14626 319 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 SERPINI2O75830 405 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 MYBPC1Q00872 1141 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 GUSBP1Q15486 140 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 USP51Q70EK9 711 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 CCDC71Q8IV32 467 aaPredicted RBP14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 ARIH2OSQ8N7S6 290 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 C9orf106Q8NAJ2 232 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 ASB10Q8WXI3 467 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 TMEM45BQ96B21 275 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 TXNDC15Q96J42 360 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 Q96M85 177 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF385AQ96PM9 386 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 TM9SF2Q99805 663 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 TEX12Q9BXU0 123 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 EMC3Q9P0I2 261 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 GRHPRQ9UBQ7 328 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 TINAGQ9UJW2 476 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 GMPPBQ9Y5P6 360 aa14.75□□□□□ -0.05
CCDC90B-202ENST00000455220 TEX13CA0A0J9YWL9 993 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 B8ZZF3 427 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 SURF4O15260 269 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 SS18L1O75177 396 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 BCL10O95999 233 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 HMGN1P05114 100 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 YES1P07947 543 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 TIMP3P35625 211 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 TOP3AQ13472 1001 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 MELKQ14680 651 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF362Q5T0B9 420 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 C6orf52Q5T4I8 152 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 EEF1A1P5Q5VTE0 462 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 FAM205BPQ63HN1 556 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 OR2A2Q6IF42 318 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 B3GNT6Q6ZMB0 384 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 MCEMP1Q8IX19 187 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 OR6X1Q8NH79 312 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 RASD2Q96D21 266 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 GMPPAQ96IJ6 420 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 ADAD1Q96M93 576 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 PRRG3Q9BZD7 231 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 CMC2Q9NRP2 79 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 RAB26Q9ULW5 256 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 RCE1Q9Y256 329 aa14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 PHF3Q92576 2039 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-202ENST00000455220 ZNF432O94892 652 aa14.73□□□□□ -0.05
CCDC90B-202ENST00000455220 HIST1H1CP16403 213 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-202ENST00000455220 NOS3P29474 1203 aa14.73□□□□□ -0.05
CCDC90B-202ENST00000455220 NTF4P34130 210 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms