RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 LYNX1P0DP58 116 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
GPC1-206ENST00000455111 AQP1P29972 269 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 CRYBA2P53672 197 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 CDH12P55289 794 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 SH3BGRP55822 239 aaPredicted RBP13.85□□□□□ -0.19
GPC1-206ENST00000455111 PCBP3P57721 371 aaKnown RBP13.85□□□□□ -0.19
GPC1-206ENST00000455111 OR1Q1Q15612 314 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 TRIP10Q15642 601 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 TTMPQ5BVD1 217 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 FAM120AOSQ5T036 256 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 CARD17Q5XLA6 110 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 REEP3Q6NUK4 255 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 RETREG3Q86VR2 466 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 RBM45Q8IUH3 476 aaKnown RBP13.85□□□□□ -0.19
GPC1-206ENST00000455111 ADPRHL1Q8NDY3 354 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 PIMREGQ9BSJ6 248 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 BEX2Q9BXY8 128 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 ZNF385DQ9H6B1 395 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 TMEM38AQ9H6F2 299 aa13.85□□□□□ -0.19
GPC1-206ENST00000455111 ZNF99A8MXY4 864 aaPredicted RBP13.84□□□□□ -0.19
GPC1-206ENST00000455111 hCG_2039718K7EN88 272 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 M0R3H8 397 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ERLIN1O75477 346 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 IFNA2P01563 188 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ZNF35P13682 527 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ZNF14P17017 642 aaPredicted RBP13.84□□□□□ -0.19
GPC1-206ENST00000455111 ZNF23P17027 643 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 GIFP27352 417 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 GZMKP49863 264 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 NPRL3Q12980 569 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 SCARB2Q14108 478 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 CARTPTQ16568 116 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 DUSP7Q16829 419 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 FAM91A1Q658Y4 838 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ULK3Q6PHR2 472 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ZNF627Q7L945 461 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 LRP11Q86VZ4 500 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ZNF584Q8IVC4 421 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 OR4F15Q8NGB8 312 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 ARHGDIGQ99819 225 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 CCDC28BQ9BUN5 200 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 MRPL37Q9BZE1 423 aaKnown RBP13.84□□□□□ -0.19
GPC1-206ENST00000455111 RAD21L1Q9H4I0 556 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 MYEF2Q9P2K5 600 aaKnown RBP13.84□□□□□ -0.19
GPC1-206ENST00000455111 FKBP7Q9Y680 259 aa13.84□□□□□ -0.19
GPC1-206ENST00000455111 LOC100289279A0A1B0GTE1 492 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 C5orf58C9J3I9 102 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 POLR3GO15318 223 aaPredicted RBP13.83□□□□□ -0.2
GPC1-206ENST00000455111 OR2T1O43869 369 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 OPN1SWP03999 348 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 TACSTD2P09758 323 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 BMP4P12644 408 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 APEHP13798 732 aaKnown RBP13.83□□□□□ -0.2
GPC1-206ENST00000455111 NPR2P20594 1047 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 POU3F1Q03052 451 aaPredicted RBP13.83□□□□□ -0.2
GPC1-206ENST00000455111 RIN1Q13671 783 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 KRT80Q6KB66 452 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 SPATA21Q7Z572 469 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 CARM1Q86X55 608 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 GPR137CQ8N3F9 429 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 SMYD1Q8NB12 490 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 PIK3C3Q8NEB9 887 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 OR6S1Q8NH40 331 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 DNAJA4Q8WW22 397 aaPredicted RBP13.83□□□□□ -0.2
GPC1-206ENST00000455111 TMEM158Q8WZ71 300 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 SHARPINQ9H0F6 387 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 ARMC7Q9H6L4 198 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 RPS6KB2Q9UBS0 482 aa13.83□□□□□ -0.2
GPC1-206ENST00000455111 TESQ9UGI8 421 aaKnown RBP13.83□□□□□ -0.2
GPC1-206ENST00000455111 TMEM247A6NEH6 219 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 PLPP3O14495 311 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 TGDSO95455 350 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 PATE4P0C8F1 98 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 DAOP14920 347 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 B4GALT1P15291 398 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
GPC1-206ENST00000455111 ARR3P36575 388 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 RGS8P57771 180 aaPredicted RBP13.82□□□□□ -0.2
GPC1-206ENST00000455111 PIGFQ07326 219 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 SNTB2Q13425 540 aaKnown RBP13.82□□□□□ -0.2
GPC1-206ENST00000455111 CAMK2DQ13557 499 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 C1DQ13901 141 aaKnown RBP13.82□□□□□ -0.2
GPC1-206ENST00000455111 MFSD13AQ14CX5 517 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 AGKQ53H12 422 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 FAM166AQ6J272 317 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 NET1Q7Z628 596 aaPredicted RBP13.82□□□□□ -0.2
GPC1-206ENST00000455111 UEVLDQ8IX04 471 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 OR6T1Q8NGN1 323 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 SLC47A1Q96FL8 570 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 TPK1Q9H3S4 243 aa13.82□□□□□ -0.2
GPC1-206ENST00000455111 MRPL39Q9NYK5 338 aaKnown RBP13.82□□□□□ -0.2
GPC1-206ENST00000455111 SH3PXD2BA1X283 911 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 CD247P20963 164 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 NR4A1P22736 598 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 PAX7P23759 505 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 GZMMP51124 257 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms