RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CRLF2Q9HC73 371 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 GPR35Q9HC97 309 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 SELENONQ9NZV5 590 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 REV1Q9UBZ9 1251 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 CORINQ9Y5Q5 1042 aa6.93□□□□□ -1.3
NIF3L1-209ENST00000454952 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 TMEM129A0AVI4 362 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SH3PXD2BA1X283 911 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 WDR91A4D1P6 747 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 TRIM77I1YAP6 450 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 RGS16O15492 202 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SPRY1O43609 319 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 FZD7O75084 574 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC22A3O75751 556 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 RAB36O95755 333 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 BCHEP06276 602 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 GSNP06396 782 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 MSMBP08118 114 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SAGP10523 405 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 ACHEP22303 614 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 GLRXP35754 106 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 CDKN2CP42773 168 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 GPR6P46095 362 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 RPS5P46782 204 aaKnown RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 LIMS1P48059 325 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 NME5P56597 212 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SELENOVP59797 346 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 ACTG1P63261 375 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 LGALS3BPQ08380 585 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 CEACAM16Q2WEN9 425 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF311Q5JNZ3 666 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 GKAP1Q5VSY0 366 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 ATG16L1Q676U5 607 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 USP43Q70EL4 1123 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 H1FNTQ75WM6 255 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 LINGO2Q7L985 606 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 CROCCP2Q86T23 111 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 MDP1Q86V88 176 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 UEVLDQ8IX04 471 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 CDK20Q8IZL9 346 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SCAIQ8N9R8 606 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 OR6S1Q8NH40 331 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SGMS2Q8NHU3 365 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 RDH5Q92781 318 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 TMEM186Q96B77 213 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 LRR1Q96L50 414 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 OR2M2Q96R28 347 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SORT1Q99523 831 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 EPYCQ99645 322 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 SOX7Q9BT81 388 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 PTDSS2Q9BVG9 487 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 RBM4Q9BWF3 364 aaKnown RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF385DQ9H6B1 395 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 METTL17Q9H7H0 456 aaPredicted RBP6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 TPT1P8Q9HAU6 139 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 BCL2L10Q9HD36 194 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 BRD7Q9NPI1 651 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 POFUT2Q9Y2G5 429 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 GPR45Q9Y5Y3 372 aa6.92□□□□□ -1.3
NIF3L1-209ENST00000454952 TRAV36DV7A0A075B6V5 113 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 SLC22A23A1A5C7 686 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF726A6NNF4 738 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 C5orf58C9J3I9 102 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 HDAC3O15379 428 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 UBL3O95164 117 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 VIMP08670 466 aaKnown RBP6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 CELA3BP08861 270 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 FAM157BP0CG42 384 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 CD79AP11912 226 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 ETFAP13804 333 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 NQO1P15559 274 aaKnown RBP6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 CREB1P16220 341 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 CFPP27918 469 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 PRKAR1BP31321 381 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 IL2RGP31785 369 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 NCALDP61601 193 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 FADDQ13158 208 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 CCNIQ14094 377 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 TRIP10Q15642 601 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 KRT71Q3SY84 523 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 FAM91A1Q658Y4 838 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 KRT80Q6KB66 452 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 ZNF627Q7L945 461 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 DPPA2Q7Z7J5 298 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 SERPINA11Q86U17 422 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 C20orf196Q8IYI0 205 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 TMEM123Q8N131 208 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 CLIP4Q8N3C7 705 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 C3orf56Q8N813 242 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 LSMEM1Q8N8F7 131 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 BHLHE22Q8NFJ8 381 aaPredicted RBP6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 SEMA6DQ8NFY4 1073 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 BBS10Q8TAM1 723 aa6.91□□□□□ -1.3
NIF3L1-209ENST00000454952 FAM216AQ8WUB2 273 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms