RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ETFDHQ16134 617 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 PRTGQ2VWP7 1150 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 TMEM69Q5SWH9 247 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 PRAMEF20Q5VT98 475 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 YOD1Q5VVQ6 348 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 LRRC28Q86X40 367 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 SIAH3Q8IW03 269 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 ASCC1Q8N9N2 400 aaKnown RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 SLC7A6Q92536 515 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 B3GNT4Q9C0J1 378 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 DPAGT1Q9H3H5 408 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 BAIAP2Q9UQB8 552 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 A0A1W2PQ72 361 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 EFCAB7A8K855 629 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 MEN1O00255 615 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 IGHA1P01876 353 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 APEHP13798 732 aaKnown RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 CXCL12P48061 93 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 MTNR1BP49286 362 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 GPR50Q13585 617 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 CORO6Q6QEF8 472 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 DPY19L2P2Q6ZN68 376 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 OR6F1Q8NGZ6 308 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 OR2T4Q8NH00 348 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 PTPMT1Q8WUK0 201 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-213ENST00000454468 TAAR8Q969N4 342 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 TMEM106AQ96A25 262 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 SEMA4CQ9C0C4 833 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 METTL7AQ9H8H3 244 aa10.91□□□□□ -0.66
SMPD4-213ENST00000454468 E9PQ18 207 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 OC90Q02509 493 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-213ENST00000454468 POU4F2Q12837 409 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 TAF13Q15543 124 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.9□□□□□ -0.66
SMPD4-213ENST00000454468 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 CTHRC1Q96CG8 243 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 CDCP1Q9H5V8 836 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ELOVL3Q9HB03 270 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 KCNG2Q9UJ96 466 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ZMIZ1Q9ULJ6 1067 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 SLC22A13Q9Y226 551 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 CACNG2Q9Y698 323 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 HMX3A6NHT5 357 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 LMO7DNF2Z398 122 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF593O00488 134 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-213ENST00000454468 KLF4O43474 513 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 AKR7A2O43488 359 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ZFPL1O95159 310 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ARSBP15848 533 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 PGCP20142 388 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 DIO1P49895 249 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 PLAURQ03405 335 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF117Q03924 483 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 SLC25A30Q5SVS4 291 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 CHST4Q8NCG5 386 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 NAXEQ8NCW5 288 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 GDF15Q99988 308 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 TMEM43Q9BTV4 400 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 MOV10Q9HCE1 1003 aaKnown RBP10.9□□□□□ -0.66
SMPD4-213ENST00000454468 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 PPIEQ9UNP9 301 aaKnown RBP10.9□□□□□ -0.66
SMPD4-213ENST00000454468 FLVCR2Q9UPI3 526 aa10.9□□□□□ -0.66
SMPD4-213ENST00000454468 SUSD5O60279 629 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 PTP4A3O75365 173 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 PNMTP11086 282 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 SRMP19623 302 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 PRKXP51817 358 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 ASAH1Q13510 395 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 CDK5R1Q15078 307 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 FAM199XQ6PEV8 388 aaPredicted RBP10.9□□□□□ -0.67
SMPD4-213ENST00000454468 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 SYNPRQ8TBG9 265 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 STT3BQ8TCJ2 826 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 CCDC74AQ96AQ1 378 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 UPRTQ96BW1 309 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 KCNK15Q9H427 330 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 LIN7BQ9HAP6 207 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 TAS2R10Q9NYW0 307 aa10.9□□□□□ -0.67
SMPD4-213ENST00000454468 EIF3KQ9UBQ5 218 aaKnown RBP10.9□□□□□ -0.67
SMPD4-213ENST00000454468 PCDH15Q96QU1 1955 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 RIF1Q5UIP0 2472 aaKnown RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 NPIPA5E9PKD4 350 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 PIAS2O75928 621 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 SSTR2P30874 369 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 DNASE1L1P49184 302 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 AFF3P51826 1226 aaKnown RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 EFNB1P98172 346 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 SF3A2Q15428 464 aaKnown RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 FCN2Q15485 313 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 NUP54Q7Z3B4 507 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 MEIOBQ8N635 442 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 EID2Q8N6I1 236 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 OR10H5Q8NGA6 315 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 GRPEL2Q8TAA5 225 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 ACOT12Q8WYK0 555 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 KISS1RQ969F8 398 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 SLC46A1Q96NT5 459 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms