RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 CYTIPO60759 359 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 CCNB2O95067 398 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 ALPLP05186 524 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 HSPA13P48723 471 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 PPP1R8Q12972 351 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 ITGADQ13349 1161 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 P2RY6Q15077 328 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 MICAQ29983 383 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 OTUD3Q5T2D3 398 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 WBP2NLQ6ICG8 309 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 GRINAQ7Z429 371 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 HS3ST5Q8IZT8 346 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 OR52J3Q8NH60 311 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 SLC7A13Q8TCU3 470 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 DNAJC9Q8WXX5 260 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 SLC38A4Q969I6 547 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 PERPQ96FX8 193 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 MPP4Q96JB8 637 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 SELENONQ9NZV5 590 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 KIF17Q9P2E2 1029 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 RPS6KB2Q9UBS0 482 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 CHRNA9Q9UGM1 479 aa15.94■□□□□ 0.14
SQSTM1-204ENST00000453046 ARID1AO14497 2285 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 ROS1P08922 2347 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 SH3PXD2BA1X283 911 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 FKBP2P26885 142 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 OR3A2P47893 321 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 IDH2P48735 452 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 AQP4P55087 323 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 RFX4Q33E94 735 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 ALG10BQ5I7T1 473 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 FAHD1Q6P587 224 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 ULK3Q6PHR2 472 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 GALNT5Q7Z7M9 940 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 BIVMQ86UB2 503 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 KRTAP1-3Q8IUG1 177 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF100Q8IYN0 542 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 TMEM171Q8WVE6 324 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 ACOT11Q8WXI4 607 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 HSD17B8Q92506 261 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 DNAJA3Q96EY1 480 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 SLC29A1Q99808 456 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 PRR14Q9BWN1 585 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 C12orf10Q9HB07 376 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 SLC7A7Q9UM01 511 aa15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 MAGED1Q9Y5V3 778 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF724A8MTY0 619 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF814B7Z6K7 855 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 LYPD3O95274 346 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 PLAUP00749 431 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 THY1P04216 161 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 INHBBP09529 407 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ANXA8P13928 327 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 CCNA2P20248 432 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 IFNGR2P38484 337 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 RBM34P42696 430 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 HTR3AP46098 478 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 LAPTM4AQ15012 233 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 TAB1Q15750 504 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF770Q6IQ21 691 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 PODNL1Q6PEZ8 512 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 TBPL2Q6SJ96 375 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 Q6ZT83 130 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 BHLHA15Q7RTS1 189 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 CADM2Q8N3J6 435 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 GALNT4Q8N4A0 578 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ATG16L2Q8NAA4 619 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 C3orf49Q96BT1 292 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 USB1Q9BQ65 265 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 PRSS27Q9BQR3 290 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF426Q9BUY5 554 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ESRP2Q9H6T0 727 aaKnown RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 KRCC1Q9NPI7 259 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 SMPD3Q9NY59 655 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 EMC3Q9P0I2 261 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 PRSS50Q9UI38 385 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ING1Q9UK53 422 aaPredicted RBP15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 HDGFL3Q9Y3E1 203 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 ORC6Q9Y5N6 252 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 DSCAMO60469 2012 aa15.92■□□□□ 0.14
SQSTM1-204ENST00000453046 NIPBLQ6KC79 2804 aaeCLIP15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 HS3ST1O14792 307 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 LYZL6O75951 148 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 PNMTP11086 282 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 FUT4P22083 530 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 CBLP22681 906 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 IGFBP5P24593 272 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 SLC1A3P43003 542 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 UGT2B15P54855 530 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 SEC23BQ15437 767 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 STK11Q15831 433 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 KDM4DQ6B0I6 523 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF730Q6ZMV8 503 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 OR4K5Q8NGD3 323 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 OR9Q2Q8NGE9 314 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 MAGEE2Q8TD90 523 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 AKAP1Q92667 903 aaKnown RBP eCLIP15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 Q96MF0 132 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 HS6ST2Q96MM7 605 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms